Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RNU6-374P-201ENST00000364146 108 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 MIR512-1-201ENST00000384913 84 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL109941.1-201ENST00000401925 229 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL355497.1-201ENST00000406262 551 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 RNA5SP229-201ENST00000410809 99 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 ATP5A1P2-201ENST00000412323 255 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 RPL24P2-201ENST00000421023 475 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL160175.1-201ENST00000428124 247 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL139132.1-201ENST00000431587 344 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 OR4K11P-201ENST00000431829 904 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 MRPS33P4-201ENST00000434892 317 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 RPL23AP74-201ENST00000437246 471 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AC104389.3-201ENST00000445629 235 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 MRPL50P4-201ENST00000446432 475 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 ST13P20-201ENST00000447996 1065 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 RPL35AP28-201ENST00000459730 331 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 SRIP1-201ENST00000489235 288 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AC110794.1-201ENST00000505816 425 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AC067904.2-201ENST00000517322 1283 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AC087272.1-201ENST00000523624 533 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AP000526.1-201ENST00000603308 1388 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL035413.2-201ENST00000604801 525 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AC073111.2-201ENST00000605657 1075 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL445222.1-201ENST00000607259 628 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL162574.2-201ENST00000614618 657 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL354798.1-201ENST00000622505 329 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 FP236240.3-201ENST00000623061 327 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 AL049780.3-201ENST00000624612 1583 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 OR52H1-202ENST00000641796 1061 ntBASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 MIR26A1-201ENST00000362205 77 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 RNA5SP119-201ENST00000362715 117 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 OR6K3-202ENST00000368146 996 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 Y_RNA.493-201ENST00000384422 102 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 MIR30B-201ENST00000384850 88 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 OR6C69P-201ENST00000394268 893 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 ST13P16-201ENST00000401760 781 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 RNU6-193P-201ENST00000410977 107 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 LINC01881-201ENST00000416103 412 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC009480.2-201ENST00000422916 432 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 ATP5C1P1-201ENST00000441945 895 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 Z95327.1-201ENST00000446082 482 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AL031659.1-201ENST00000447075 539 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 snoU13.22-201ENST00000459428 104 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC114982.2-201ENST00000461396 358 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 RPS3AP43-201ENST00000479743 781 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC010460.1-201ENST00000507087 466 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 NDUFB4P2-201ENST00000509515 391 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 RN7SKP96-201ENST00000516948 297 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 SNORA31.21-201ENST00000517180 77 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC109329.2-201ENST00000519658 482 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 MRPL49P2-201ENST00000521066 465 ntBASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.52□□□□□ -2.17
SPTSSBQ8NFR3 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms