Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC068787.1-201ENST00000623908 691 ntBASIC3.69□□□□□ -1.82
RTL3Q8N8U3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 RNA5SP295-201ENST00000362655 121 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 DEFB109C-201ENST00000382575 264 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 DEFB109B-201ENST00000382656 264 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 RNU6-328P-201ENST00000390887 106 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 Y_RNA.578-201ENST00000390903 88 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AL391417.1-201ENST00000404100 426 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 U3.39-201ENST00000408569 239 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 RNU6-712P-201ENST00000410558 100 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 RAC1P8-201ENST00000427086 527 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC017083.1-201ENST00000428093 483 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 MTCO1P3-201ENST00000429327 192 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AL590103.1-201ENST00000434488 307 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 MTCYBP42-201ENST00000444653 1130 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC073387.1-201ENST00000453261 709 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 RPL6P9-201ENST00000466502 859 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC104619.4-201ENST00000510773 249 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 RNA5SP468-201ENST00000516782 93 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 RNU6-1028P-201ENST00000517164 93 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AP000926.4-201ENST00000527351 454 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AGGF1P5-201ENST00000567900 919 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 MIR5708-201ENST00000579723 85 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC010591.1-201ENST00000603941 649 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC024060.1-201ENST00000607052 494 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC011816.2-201ENST00000607089 556 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC231759.1-201ENST00000616455 597 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AL157770.1-201ENST00000623049 439 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 AP003355.3-201ENST00000623465 114 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 U6.98-201ENST00000637157 84 ntBASIC3.68□□□□□ -1.82
RTL3Q8N8U3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.68□□□□□ -1.82
RTL3Q8N8U3 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AF117829.1-206ENST00000621883 3802 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 SNORA73.2-201ENST00000364946 201 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 SUGT1P1-201ENST00000379514 476 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 RPS3AP25-201ENST00000411660 793 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 MTATP6P20-201ENST00000414147 562 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 CYCSP4-201ENST00000429682 331 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AL365396.1-201ENST00000430854 671 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC093752.1-206ENST00000511823 336 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 SNORA70.18-201ENST00000516696 98 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC026403.1-201ENST00000518938 295 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC027309.2-201ENST00000520566 192 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC126177.3-201ENST00000551839 688 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AL132857.1-201ENST00000555180 708 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AL121576.1-201ENST00000556055 276 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC141257.3-201ENST00000572906 215 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 MTCO2P2-201ENST00000591258 225 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AL035411.2-201ENST00000604022 421 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC073387.2-201ENST00000604797 784 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC055876.5-201ENST00000605667 259 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 CYP3A51P-201ENST00000633513 256 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AL034408.1-202ENST00000636088 415 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC006927.4-201ENST00000639187 543 ntBASIC3.67□□□□□ -1.82
RTL3Q8N8U3 AC009093.8-201ENST00000641769 292 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms