Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 RNU6-253P-201ENST00000384730 105 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AL021407.1-201ENST00000404531 386 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 ZNF603P-201ENST00000405613 487 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 NUP35P2-201ENST00000416748 943 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 MORF4L1P6-201ENST00000418771 268 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 MTND1P29-201ENST00000448112 647 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 SETP11-201ENST00000473027 690 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AC010301.1-201ENST00000473936 355 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 MTCYBP17-201ENST00000503579 789 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 BNIP3P41-201ENST00000503774 571 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 ZNF705CP-201ENST00000530515 889 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 CYCSP2-201ENST00000558168 301 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AC011260.1-201ENST00000578420 472 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AC068790.5-201ENST00000602741 355 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AL592436.1-201ENST00000605135 558 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AC068722.2-201ENST00000618734 544 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 AC012442.3-202ENST00000636742 206 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 Z82217.1-201ENST00000625157 8149 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS52Q8N1B4 ZNF962P-201ENST00000443465 3140 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 SNORA60-201ENST00000362396 134 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 RNU6-1243P-201ENST00000364028 107 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 SNORA70.4-201ENST00000365509 134 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 RNU6-213P-201ENST00000384051 104 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 RPL23AP39-201ENST00000415533 405 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AL953862.1-201ENST00000423016 168 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 BX119904.4-201ENST00000424402 301 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 FTH1P6-201ENST00000430768 320 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC092427.1-201ENST00000439177 601 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 RPL23AP35-201ENST00000451906 501 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 RPS20P21-201ENST00000466859 343 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 RN7SL585P-201ENST00000470538 280 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC087385.1-201ENST00000475062 312 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 RPS26P15-201ENST00000488067 348 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 OR4G11P-201ENST00000492842 939 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC017037.1-201ENST00000508460 471 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC104057.1-201ENST00000515547 497 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AGGF1P8-201ENST00000562979 1000 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 MIR4504-201ENST00000577413 92 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 WISP1-OT1-201ENST00000602893 642 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC008739.3-201ENST00000603262 127 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC025946.2-201ENST00000603398 234 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AL590229.1-201ENST00000603497 542 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AL596327.1-201ENST00000603629 213 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 OR2AS2P-201ENST00000606902 342 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 MIR6868-201ENST00000611215 58 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS52Q8N1B4 MIR7702-201ENST00000621931 59 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC091931.1-201ENST00000623488 728 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 AC099063.3-201ENST00000642066 185 ntBASIC4.36□□□□□ -1.71
VPS52Q8N1B4 DDX43P2-201ENST00000604753 1354 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms