Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC019206.1-201ENST00000621938 425 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 DUXAP9-208ENST00000622815 614 ntBASIC5.83□□□□□ -1.48
USP48Q86UV5 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.83□□□□□ -1.48
USP48Q86UV5 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP48Q86UV5 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
USP48Q86UV5 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP48Q86UV5 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
USP48Q86UV5 AC114546.3-201ENST00000623582 1734 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
USP48Q86UV5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
USP48Q86UV5 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP48Q86UV5 A2MP1-204ENST00000566278 4130 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
USP48Q86UV5 Y_RNA.1-201ENST00000352915 104 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 RNU6-761P-201ENST00000384148 107 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 AC078974.1-201ENST00000411597 223 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 AC114755.2-201ENST00000413520 361 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.82□□□□□ -1.48
USP48Q86UV5 MTND3P17-201ENST00000416968 344 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.82□□□□□ -1.48
USP48Q86UV5 AC133104.1-201ENST00000429100 218 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 AC002486.1-201ENST00000435098 391 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.82□□□□□ -1.48
USP48Q86UV5 HMGB1P31-201ENST00000437242 427 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 MTCO3P18-201ENST00000440206 761 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 AL450023.3-201ENST00000440592 271 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.82□□□□□ -1.48
USP48Q86UV5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.82□□□□□ -1.48
USP48Q86UV5 RPS4XP4-201ENST00000443195 763 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.82□□□□□ -1.48
USP48Q86UV5 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.82□□□□□ -1.48
USP48Q86UV5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.82□□□□□ -1.48
USP48Q86UV5 AP001992.1-205ENST00000462248 379 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.82□□□□□ -1.48
USP48Q86UV5 RPL21P129-201ENST00000491732 478 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.82□□□□□ -1.48
USP48Q86UV5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.82□□□□□ -1.48
USP48Q86UV5 RN7SKP82-201ENST00000516786 223 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 AC109635.3-201ENST00000529536 185 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.82□□□□□ -1.48
USP48Q86UV5 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.82□□□□□ -1.48
USP48Q86UV5 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.82□□□□□ -1.48
USP48Q86UV5 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.82□□□□□ -1.48
USP48Q86UV5 AP000907.4-201ENST00000604143 237 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 MIR92B-201ENST00000607575 96 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 AL596245.1-201ENST00000618994 362 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 CR381572.2-201ENST00000624852 397 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
USP48Q86UV5 AC024560.2-201ENST00000507981 1497 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.82□□□□□ -1.48
USP48Q86UV5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
USP48Q86UV5 AC104260.2-201ENST00000623551 3497 ntBASIC5.82□□□□□ -1.48
USP48Q86UV5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP48Q86UV5 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.81□□□□□ -1.48
USP48Q86UV5 SAGE2P-201ENST00000420011 2126 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP48Q86UV5 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
USP48Q86UV5 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
USP48Q86UV5 RPL23AP32-201ENST00000395315 459 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 AC127391.1-201ENST00000411737 98 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.81□□□□□ -1.48
USP48Q86UV5 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AL590609.2-201ENST00000421430 368 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.81□□□□□ -1.48
USP48Q86UV5 ELOCP14-201ENST00000428070 331 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 RPS27AP12-201ENST00000429552 465 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 MTCYBP45-201ENST00000435243 565 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 ELOCP7-201ENST00000439968 331 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.81□□□□□ -1.48
USP48Q86UV5 RPL7L1P1-201ENST00000448259 785 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 NFU1P2-201ENST00000448700 469 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 AL691482.1-201ENST00000453255 87 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.81□□□□□ -1.48
USP48Q86UV5 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.81□□□□□ -1.48
USP48Q86UV5 NIP7P2-201ENST00000485801 544 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 ARL4AP2-201ENST00000507378 601 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AC105914.1-201ENST00000511798 226 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AC123904.2-201ENST00000548059 300 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.81□□□□□ -1.48
USP48Q86UV5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AC107954.1-201ENST00000565906 727 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 AC099489.2-201ENST00000574976 260 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 CYCSP40-201ENST00000575927 294 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.81□□□□□ -1.48
USP48Q86UV5 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AC025588.3-201ENST00000604182 274 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 AC008277.2-201ENST00000605196 797 ntBASIC5.81□□□□□ -1.48
USP48Q86UV5 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AL133173.2-201ENST00000614270 90 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms