Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 DUXAP5-201ENST00000529668 529 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.8□□□□□ -1.8
LDB1Q86U70 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 ELOCP32-201ENST00000548625 324 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.8□□□□□ -1.8
LDB1Q86U70 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AL360157.1-201ENST00000565962 87 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AC002400.1-201ENST00000569310 726 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 MIR3160-1-201ENST00000577972 85 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 MIR4999-201ENST00000585029 91 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.8□□□□□ -1.8
LDB1Q86U70 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 VN1R79P-201ENST00000593540 513 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AC006539.2-201ENST00000601729 572 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AC067959.1-201ENST00000604334 379 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 MIR486-1-201ENST00000612171 68 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AC004009.2-201ENST00000623016 728 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AC040168.1-201ENST00000623594 991 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AC091905.1-201ENST00000624400 311 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AC079416.3-201ENST00000624479 549 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.8□□□□□ -1.8
LDB1Q86U70 AC008725.1-201ENST00000605123 2263 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LDB1Q86U70 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 AL031985.3-201ENST00000565390 2449 ntBASIC3.8□□□□□ -1.8
LDB1Q86U70 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDB1Q86U70 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDB1Q86U70 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDB1Q86U70 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDB1Q86U70 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDB1Q86U70 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDB1Q86U70 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDB1Q86U70 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDB1Q86U70 SOD2P1-201ENST00000396543 562 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDB1Q86U70 HLFP1-201ENST00000402375 499 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 RNU6-628P-201ENST00000410675 107 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB1Q86U70 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB1Q86U70 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.79□□□□□ -1.8
LDB1Q86U70 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB1Q86U70 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB1Q86U70 MTND1P31-201ENST00000449206 961 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 RNU7-136P-201ENST00000458819 69 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 MTCO2P6-201ENST00000463134 685 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 FAM172BP-201ENST00000487497 1089 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 RN7SL323P-201ENST00000494712 295 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDB1Q86U70 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
LDB1Q86U70 AC004069.2-201ENST00000505438 1114 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB1Q86U70 AC010460.1-201ENST00000507087 466 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LDB1Q86U70 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB1Q86U70 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.79□□□□□ -1.8
LDB1Q86U70 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB1Q86U70 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.79□□□□□ -1.8
LDB1Q86U70 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB1Q86U70 MTATP6P15-201ENST00000527233 835 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 AP000926.4-201ENST00000527351 454 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDB1Q86U70 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
LDB1Q86U70 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB1Q86U70 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.79□□□□□ -1.8
LDB1Q86U70 AC110741.2-201ENST00000605278 268 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB1Q86U70 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
LDB1Q86U70 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LDB1Q86U70 AC079228.1-201ENST00000624774 1049 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB1Q86U70 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.79□□□□□ -1.8
LDB1Q86U70 AC103706.2-201ENST00000638080 240 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 AC097714.1-201ENST00000511272 1647 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.79□□□□□ -1.8
LDB1Q86U70 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDB1Q86U70 AC095050.2-201ENST00000510748 1458 ntBASIC3.79□□□□□ -1.8
LDB1Q86U70 RPL23AP57-201ENST00000332361 466 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 OR5H2-201ENST00000355273 945 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 U1.1-201ENST00000384101 164 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 RNU1-89P-201ENST00000384592 164 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 PIGPP2-201ENST00000411569 458 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 RAP1BP1-201ENST00000412709 553 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AMD1P2-201ENST00000412936 992 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 TPMTP2-201ENST00000414372 726 ntBASIC3.78□□□□□ -1.8
LDB1Q86U70 AC107081.1-201ENST00000414975 361 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms