Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 ARL5AP4-201ENST00000430731 512 ntBASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 AC108938.1-201ENST00000451204 136 ntBASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 RNU6-56P-201ENST00000516986 93 ntBASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 BX664608.1-201ENST00000610519 487 ntBASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 AP004607.9-201ENST00000618202 316 ntBASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC171Q6TFL3 AC009501.3-201ENST00000605001 1352 ntBASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 SNORA25.6-201ENST00000364121 118 ntBASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 RNU1-101P-201ENST00000391171 127 ntBASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 AL031679.1-201ENST00000400616 525 ntBASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 RAD23BP2-201ENST00000416003 1207 ntBASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 CACYBPP1-201ENST00000438592 684 ntBASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 AC011816.1-201ENST00000441346 546 ntBASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 AC006445.2-201ENST00000510061 472 ntBASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 AC026412.2-201ENST00000512270 1075 ntBASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 OR7K1P-201ENST00000546439 926 ntBASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 SETP2-201ENST00000553886 926 ntBASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 AC067852.4-201ENST00000590314 478 ntBASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC171Q6TFL3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 FTLP6-201ENST00000355274 422 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 RPL21P75-201ENST00000396599 483 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 RPL21P28-201ENST00000401418 483 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AL139039.1-201ENST00000401900 692 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AL592114.1-201ENST00000403842 483 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 RPLP0P7-201ENST00000416050 667 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 RPL31P45-201ENST00000419532 356 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 RPL21P39-201ENST00000463605 483 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC011979.1-201ENST00000472300 483 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC126182.1-201ENST00000478134 357 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 RPL21P93-201ENST00000480465 489 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 TRBV8-1-201ENST00000481590 279 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC233702.1-201ENST00000482905 502 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC087190.1-201ENST00000484462 480 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC093663.2-201ENST00000484625 313 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC093591.1-201ENST00000491435 481 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 RPL21P16-201ENST00000495531 483 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC078918.1-201ENST00000498515 228 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC243972.3-201ENST00000539655 198 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC004696.1-201ENST00000614345 607 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 AC123768.4-201ENST00000616244 701 ntBASIC3.12□□□□□ -1.91
CCDC171Q6TFL3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 AC007336.1-201ENST00000576365 3828 ntBASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 ELOCP6-201ENST00000429066 328 ntBASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 ELOCP12-201ENST00000458706 328 ntBASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 TBCAP3-201ENST00000512475 312 ntBASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 AC096725.1-201ENST00000514266 313 ntBASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 AP000526.1-201ENST00000603308 1388 ntBASIC3.11□□□□□ -1.91
CCDC171Q6TFL3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 SNORD62.1-201ENST00000362541 86 ntBASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 DEFA7P-201ENST00000382676 285 ntBASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 MIR196B-201ENST00000384852 84 ntBASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 RPL19P1-201ENST00000411635 428 ntBASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 MRPL50P2-201ENST00000416821 482 ntBASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 SRIP1-201ENST00000489235 288 ntBASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC171Q6TFL3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms