Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RN7SKP95-201ENST00000362860 303 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 SNORA51.1-201ENST00000363243 140 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 RNU6-335P-201ENST00000364563 113 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 ARL4AP5-201ENST00000404372 599 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 RN7SKP213-201ENST00000410746 298 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 MTCO3P12-201ENST00000416718 547 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 OR1AA1P-201ENST00000419597 916 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AC092832.1-201ENST00000422934 400 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 MTND1P34-201ENST00000438556 671 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 ATP5C1P1-201ENST00000441945 895 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 RPS17P13-201ENST00000448974 407 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AC234775.1-201ENST00000454247 670 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 S100A11P1-201ENST00000477525 312 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AC093278.1-201ENST00000494700 600 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AC015795.1-201ENST00000513669 327 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AP004371.1-201ENST00000525240 214 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AP003122.4-201ENST00000530980 758 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 CYP4A43P-201ENST00000568156 121 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AC007599.1-201ENST00000568688 1174 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AL356432.3-201ENST00000568952 465 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 HMGN1P30-201ENST00000589286 268 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 SNRPGP15-201ENST00000600149 222 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AL451086.1-201ENST00000605596 223 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AL158211.4-201ENST00000606988 584 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AC008498.1-201ENST00000613012 531 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AL023881.1-201ENST00000621088 301 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AC009268.2-201ENST00000621925 457 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 AC018555.1-201ENST00000567548 1980 ntBASIC4.41□□□□□ -1.7
RNF220Q5VTB9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF220Q5VTB9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.4□□□□□ -1.7
RNF220Q5VTB9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.4□□□□□ -1.7
RNF220Q5VTB9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF220Q5VTB9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
RNF220Q5VTB9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF220Q5VTB9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RNF220Q5VTB9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.4□□□□□ -1.7
RNF220Q5VTB9 FARSBP1-201ENST00000435808 1778 ntBASIC4.4□□□□□ -1.7
RNF220Q5VTB9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.4□□□□□ -1.7
RNF220Q5VTB9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
RNF220Q5VTB9 AL365440.1-201ENST00000436135 2167 ntBASIC4.4□□□□□ -1.7
RNF220Q5VTB9 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 RNU6-1155P-201ENST00000363554 107 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 MRPL42P2-201ENST00000403169 426 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 HMGN1P24-201ENST00000412282 298 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 RAD23BP2-201ENST00000416003 1207 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC073614.1-201ENST00000438690 650 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 RABEPKP1-201ENST00000440529 1026 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 RAC1P7-201ENST00000445367 377 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AL645939.1-201ENST00000453429 797 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 KLF3P2-201ENST00000465138 268 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 MTND1P3-201ENST00000484956 952 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 RPL7P23-201ENST00000493874 747 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC008897.1-201ENST00000494006 347 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC008953.1-201ENST00000497334 318 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 GAPDHP56-201ENST00000506031 988 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 SNORA18.6-201ENST00000516792 115 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC022880.1-201ENST00000534017 973 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 FKBP1BP1-201ENST00000553366 325 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AL391156.1-201ENST00000554965 554 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC093249.4-201ENST00000564755 259 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC012182.1-201ENST00000570133 895 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 OR4K8P-201ENST00000578842 1048 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 MIR5699-201ENST00000578903 90 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 SNORD84-203ENST00000584275 78 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF220Q5VTB9 AC005255.1-201ENST00000593748 216 ntBASIC4.4□□□□□ -1.71
RNF220Q5VTB9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms