Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 OR4G11P-201ENST00000492842 939 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 Y_RNA.673-201ENST00000516306 88 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CACNA1SQ13698 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 AL133271.1-201ENST00000538229 291 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 DEFB122-202ENST00000569013 197 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 AL162233.1-201ENST00000620014 944 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 SYT14P1-202ENST00000600441 1448 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 BTG3P1-201ENST00000435859 716 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 AL590399.6-201ENST00000446396 307 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CACNA1SQ13698 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CACNA1SQ13698 AP003102.1-201ENST00000525638 661 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 AP000857.1-201ENST00000532151 543 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 YWHAZP1-201ENST00000556286 722 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 AC007938.3-201ENST00000604965 623 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 AC103810.6-201ENST00000606708 136 ntBASIC3.16□□□□□ -1.9
CACNA1SQ13698 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.16□□□□□ -1.9
CACNA1SQ13698 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CACNA1SQ13698 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CACNA1SQ13698 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CACNA1SQ13698 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CACNA1SQ13698 HSPE1P26-201ENST00000405341 275 ntBASIC3.15□□□□□ -1.91
CACNA1SQ13698 RNU6-564P-201ENST00000410983 104 ntBASIC3.15□□□□□ -1.91
CACNA1SQ13698 AC007390.1-201ENST00000415722 356 ntBASIC3.15□□□□□ -1.91
CACNA1SQ13698 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.15□□□□□ -1.91
CACNA1SQ13698 AL590103.1-201ENST00000434488 307 ntBASIC3.15□□□□□ -1.91
CACNA1SQ13698 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.15□□□□□ -1.91
CACNA1SQ13698 AC008565.1-201ENST00000509046 885 ntBASIC3.15□□□□□ -1.91
CACNA1SQ13698 AC147055.1-201ENST00000509261 750 ntBASIC3.15□□□□□ -1.91
CACNA1SQ13698 RNU4-18P-201ENST00000516751 149 ntBASIC3.15□□□□□ -1.91
CACNA1SQ13698 MIR3186-201ENST00000577404 85 ntBASIC3.15□□□□□ -1.91
CACNA1SQ13698 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.15□□□□□ -1.91
CACNA1SQ13698 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.15□□□□□ -1.91
CACNA1SQ13698 AC012119.1-201ENST00000603184 222 ntBASIC3.15□□□□□ -1.91
CACNA1SQ13698 ABI1P1-201ENST00000603375 1120 ntBASIC3.15□□□□□ -1.91
CACNA1SQ13698 AC034236.3-201ENST00000605999 461 ntBASIC3.15□□□□□ -1.91
CACNA1SQ13698 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CACNA1SQ13698 AC110792.3-201ENST00000595906 1614 ntBASIC3.15□□□□□ -1.91
CACNA1SQ13698 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
CACNA1SQ13698 AC008264.2-201ENST00000610193 3731 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA1SQ13698 RNU6-618P-201ENST00000363518 112 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 U3.15-201ENST00000365398 212 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA1SQ13698 AL135786.1-201ENST00000415892 214 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 RPL7P12-201ENST00000446719 750 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 OR6C72P-201ENST00000451403 892 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.14□□□□□ -1.91
CACNA1SQ13698 OR7L1P-201ENST00000456181 380 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
CACNA1SQ13698 RN7SL297P-201ENST00000483161 293 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 AP001086.1-201ENST00000494882 321 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 TRAV31-201ENST00000502780 342 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 AC128657.1-201ENST00000549459 145 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 AC078899.3-201ENST00000599065 212 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA1SQ13698 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
CACNA1SQ13698 AC104454.1-201ENST00000421341 1401 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CACNA1SQ13698 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.14□□□□□ -1.91
CACNA1SQ13698 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA1SQ13698 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CACNA1SQ13698 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.14□□□□□ -1.91
CACNA1SQ13698 AL359511.1-201ENST00000402970 211 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 AL121578.1-201ENST00000428051 892 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 AL591806.2-201ENST00000433122 173 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 MRPS33P4-201ENST00000434892 317 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 HMGB1P15-201ENST00000453854 435 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 RPL31P53-201ENST00000457065 348 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 SNORD108-201ENST00000459332 71 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 RPS20P22-201ENST00000473700 357 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 OR8L1P-201ENST00000534005 955 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 AC025811.1-201ENST00000604312 472 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 AC004696.1-201ENST00000614345 607 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 AL590410.1-201ENST00000617925 333 ntBASIC3.13□□□□□ -1.91
CACNA1SQ13698 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.13□□□□□ -1.91
CACNA1SQ13698 AC110994.2-201ENST00000635481 492 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms