Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MIR3670-1-201ENST00000584160 65 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 MIR3670-3-201ENST00000584855 65 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.18□□□□□ -2.06
TFF3Q07654 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.18□□□□□ -2.06
TFF3Q07654 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.18□□□□□ -2.06
TFF3Q07654 BX664608.1-201ENST00000610519 487 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 MIR3670-4-201ENST00000612260 65 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 AC079228.1-201ENST00000624774 1049 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.18□□□□□ -2.06
TFF3Q07654 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.18□□□□□ -2.06
TFF3Q07654 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TFF3Q07654 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TFF3Q07654 AC009501.3-201ENST00000605001 1352 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TFF3Q07654 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
TFF3Q07654 SNORD114-30-201ENST00000364448 72 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.17□□□□□ -2.06
TFF3Q07654 DEFA7P-201ENST00000382676 285 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TFF3Q07654 SNORD21-201ENST00000383953 95 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 MTND4P13-201ENST00000402078 1023 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 AL513477.1-202ENST00000417061 214 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 NANOGP5-201ENST00000424456 877 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.17□□□□□ -2.06
TFF3Q07654 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.17□□□□□ -2.06
TFF3Q07654 RPL21P2-201ENST00000440049 481 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 CACYBPP2-201ENST00000453625 678 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.17□□□□□ -2.06
TFF3Q07654 snoU13.23-201ENST00000458863 104 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 HMGB1P25-201ENST00000468402 607 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.17□□□□□ -2.06
TFF3Q07654 OR7K1P-201ENST00000546439 926 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 OR4T1P-201ENST00000554933 911 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 AC010620.2-201ENST00000600135 313 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.17□□□□□ -2.06
TFF3Q07654 AL356575.1-201ENST00000603008 283 ntBASIC2.17□□□□□ -2.06
TFF3Q07654 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.17□□□□□ -2.06
TFF3Q07654 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
TFF3Q07654 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.17□□□□□ -2.06
TFF3Q07654 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
TFF3Q07654 SNORA25.6-201ENST00000364121 118 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 RNA5SP210-201ENST00000391034 120 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 AC080125.1-201ENST00000414888 684 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.16□□□□□ -2.06
TFF3Q07654 DPPA2P1-201ENST00000428060 556 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.16□□□□□ -2.06
TFF3Q07654 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.16□□□□□ -2.06
TFF3Q07654 CACYBPP1-201ENST00000438592 684 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.16□□□□□ -2.06
TFF3Q07654 AC005921.1-201ENST00000510589 286 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 AC026412.2-201ENST00000512270 1075 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.16□□□□□ -2.06
TFF3Q07654 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.16□□□□□ -2.06
TFF3Q07654 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.16□□□□□ -2.06
TFF3Q07654 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.16□□□□□ -2.06
TFF3Q07654 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.16□□□□□ -2.06
TFF3Q07654 AC068446.3-201ENST00000555285 382 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 MIR1273D-201ENST00000577266 86 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 AC091488.1-201ENST00000604239 660 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 AC103810.6-201ENST00000606708 136 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.16□□□□□ -2.06
TFF3Q07654 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.15□□□□□ -2.06
TFF3Q07654 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
TFF3Q07654 AL445437.1-201ENST00000623157 3087 ntBASIC2.15□□□□□ -2.06
TFF3Q07654 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
TFF3Q07654 EIF5P1-201ENST00000400019 1231 ntBASIC2.15□□□□□ -2.07
TFF3Q07654 AC007064.1-201ENST00000412238 351 ntBASIC2.15□□□□□ -2.07
TFF3Q07654 AC005189.1-201ENST00000431286 310 ntBASIC2.15□□□□□ -2.07
TFF3Q07654 AL353705.4-201ENST00000449661 238 ntBASIC2.15□□□□□ -2.07
TFF3Q07654 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.15□□□□□ -2.07
TFF3Q07654 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TFF3Q07654 OR5AK3P-201ENST00000527486 1297 ntBASIC2.15□□□□□ -2.07
TFF3Q07654 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.15□□□□□ -2.07
TFF3Q07654 AC034268.2-201ENST00000571784 482 ntBASIC2.15□□□□□ -2.07
TFF3Q07654 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.15□□□□□ -2.07
TFF3Q07654 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.15□□□□□ -2.07
TFF3Q07654 AL160237.3-201ENST00000604114 1013 ntBASIC2.15□□□□□ -2.07
TFF3Q07654 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
TFF3Q07654 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.15□□□□□ -2.07
TFF3Q07654 AC103798.2-201ENST00000624292 632 ntBASIC2.15□□□□□ -2.07
TFF3Q07654 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.15□□□□□ -2.07
TFF3Q07654 AC016717.2-201ENST00000609089 5141 ntBASIC2.15□□□□□ -2.07
TFF3Q07654 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TFF3Q07654 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TFF3Q07654 API5P2-201ENST00000397055 1498 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TFF3Q07654 AC087565.3-202ENST00000642085 1603 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TFF3Q07654 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TFF3Q07654 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.14□□□□□ -2.07
TFF3Q07654 RNA5SP456-201ENST00000364002 114 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 RNU1-73P-201ENST00000383971 164 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 RNU4-26P-201ENST00000410270 107 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 RPS20P25-201ENST00000412447 352 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 OR51A3P-201ENST00000413596 924 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 DPH3P2-201ENST00000422618 250 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.14□□□□□ -2.07
TFF3Q07654 RSL24D1P2-201ENST00000445584 366 ntBASIC2.14□□□□□ -2.07
TFF3Q07654 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms