Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GABPAQ06546 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.77□□□□□ -1.81
GABPAQ06546 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.77□□□□□ -1.81
GABPAQ06546 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.77□□□□□ -1.81
GABPAQ06546 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.77□□□□□ -1.81
GABPAQ06546 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.77□□□□□ -1.81
GABPAQ06546 AC006539.2-201ENST00000601729 572 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 AL022067.1-201ENST00000602426 454 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.77□□□□□ -1.81
GABPAQ06546 AC084824.4-201ENST00000620106 731 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GABPAQ06546 AC118273.1-201ENST00000525324 3006 ntBASIC3.77□□□□□ -1.81
GABPAQ06546 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
GABPAQ06546 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GABPAQ06546 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GABPAQ06546 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GABPAQ06546 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.76□□□□□ -1.81
GABPAQ06546 MTND5P28-201ENST00000438005 1594 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
GABPAQ06546 AL645568.2-201ENST00000432815 1337 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.76□□□□□ -1.81
GABPAQ06546 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
GABPAQ06546 AC093908.1-201ENST00000623125 8092 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
GABPAQ06546 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
GABPAQ06546 MIR423-201ENST00000362201 94 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 RNU6-1243P-201ENST00000364028 107 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 MIR124-3-201ENST00000384866 87 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 MIR122-201ENST00000385044 85 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
GABPAQ06546 Y_RNA.578-201ENST00000390903 88 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 AC073264.1-201ENST00000411508 416 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 RPS7P9-201ENST00000414704 586 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 MTND4P3-201ENST00000417829 541 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 RPL7P53-201ENST00000421245 739 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.76□□□□□ -1.81
GABPAQ06546 AC093698.1-201ENST00000423843 571 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 RPL7P44-201ENST00000424827 742 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 MTCYBP32-201ENST00000427945 1084 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 PSMA2P3-201ENST00000429685 675 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.76□□□□□ -1.81
GABPAQ06546 HMGN3P1-201ENST00000453847 193 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.76□□□□□ -1.81
GABPAQ06546 RPL6P9-201ENST00000466502 859 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 AC087879.1-201ENST00000474343 374 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 AP000893.1-201ENST00000474462 794 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 RPL7P23-201ENST00000493874 747 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 PRELID3BP6-201ENST00000503839 571 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 AC048346.1-201ENST00000510247 144 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 AC093752.1-206ENST00000511823 336 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.76□□□□□ -1.81
GABPAQ06546 AC093755.1-201ENST00000512950 1023 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 LRRC6P1-201ENST00000532188 885 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.76□□□□□ -1.81
GABPAQ06546 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.76□□□□□ -1.81
GABPAQ06546 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.76□□□□□ -1.81
GABPAQ06546 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.76□□□□□ -1.81
GABPAQ06546 MIR4644-201ENST00000579929 84 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 UBL5P2-201ENST00000583788 219 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.76□□□□□ -1.81
GABPAQ06546 AC096947.1-201ENST00000603233 470 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 AL445435.1-201ENST00000604232 665 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 AP005137.2-201ENST00000609238 400 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 uc_338.25-201ENST00000613756 156 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.76□□□□□ -1.81
GABPAQ06546 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
GABPAQ06546 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.76□□□□□ -1.81
GABPAQ06546 AL713922.2-201ENST00000619384 716 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 MIR4496-201ENST00000635896 61 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.76□□□□□ -1.81
GABPAQ06546 ZNF33CP-201ENST00000432492 2030 ntBASIC3.76□□□□□ -1.81
GABPAQ06546 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
GABPAQ06546 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
GABPAQ06546 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.76□□□□□ -1.81
GABPAQ06546 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
GABPAQ06546 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
GABPAQ06546 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.76□□□□□ -1.81
GABPAQ06546 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.76□□□□□ -1.81
GABPAQ06546 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.76□□□□□ -1.81
GABPAQ06546 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
GABPAQ06546 ANKRD36P1-201ENST00000344424 659 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
GABPAQ06546 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
GABPAQ06546 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
GABPAQ06546 SNORA70E-201ENST00000384492 135 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 TMSB4XP8-201ENST00000402089 135 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 RHEBP3-201ENST00000411920 351 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 TMSB4XP6-201ENST00000415187 135 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.75□□□□□ -1.81
GABPAQ06546 AC027644.1-201ENST00000419595 298 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 AC233981.1-201ENST00000423224 461 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 TMSB4XP1-201ENST00000424567 135 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 OR51AB1P-201ENST00000429046 620 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.75□□□□□ -1.81
GABPAQ06546 MTCYBP42-201ENST00000444653 1130 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 Z99714.1-201ENST00000450463 807 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 NDUFA5P7-201ENST00000452914 242 ntBASIC3.75□□□□□ -1.81
GABPAQ06546 MRPL42P4-201ENST00000453267 443 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms