Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VBP1P61758 SNORA58B-201ENST00000364259 136 ntBASIC2.6□□□□□ -1.99
VBP1P61758 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.6□□□□□ -1.99
VBP1P61758 RPS4XP7-201ENST00000406274 780 ntBASIC2.6□□□□□ -1.99
VBP1P61758 RPL7P8-201ENST00000411964 730 ntBASIC2.6□□□□□ -1.99
VBP1P61758 HSFY4P-201ENST00000415994 1181 ntBASIC2.6□□□□□ -1.99
VBP1P61758 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.6□□□□□ -1.99
VBP1P61758 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.6□□□□□ -1.99
VBP1P61758 AL590762.3-201ENST00000436372 640 ntBASIC2.6□□□□□ -1.99
VBP1P61758 AL671855.1-201ENST00000446875 1203 ntBASIC2.6□□□□□ -1.99
VBP1P61758 AC016696.1-201ENST00000446949 318 ntBASIC2.6□□□□□ -1.99
VBP1P61758 AC073901.1-201ENST00000462471 408 ntBASIC2.6□□□□□ -1.99
VBP1P61758 AC090525.1-201ENST00000479116 478 ntBASIC2.6□□□□□ -1.99
VBP1P61758 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.6□□□□□ -1.99
VBP1P61758 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.6□□□□□ -1.99
VBP1P61758 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.6□□□□□ -1.99
VBP1P61758 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.6□□□□□ -1.99
VBP1P61758 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.6□□□□□ -1.99
VBP1P61758 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.6□□□□□ -1.99
VBP1P61758 MTCO3P44-201ENST00000510977 541 ntBASIC2.6□□□□□ -1.99
VBP1P61758 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.6□□□□□ -1.99
VBP1P61758 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.6□□□□□ -1.99
VBP1P61758 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.6□□□□□ -1.99
VBP1P61758 AC006130.2-201ENST00000586202 326 ntBASIC2.6□□□□□ -1.99
VBP1P61758 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.6□□□□□ -1.99
VBP1P61758 AL356575.1-201ENST00000603008 283 ntBASIC2.6□□□□□ -1.99
VBP1P61758 AL161756.2-201ENST00000604597 246 ntBASIC2.6□□□□□ -1.99
VBP1P61758 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VBP1P61758 AC005972.3-201ENST00000606304 481 ntBASIC2.6□□□□□ -1.99
VBP1P61758 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.6□□□□□ -1.99
VBP1P61758 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.6□□□□□ -1.99
VBP1P61758 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.6□□□□□ -1.99
VBP1P61758 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.6□□□□□ -1.99
VBP1P61758 MIR6830-201ENST00000636015 70 ntBASIC2.6□□□□□ -1.99
VBP1P61758 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.6□□□□□ -1.99
VBP1P61758 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
VBP1P61758 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
VBP1P61758 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.6□□□□□ -1.99
VBP1P61758 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
VBP1P61758 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.59□□□□□ -1.99
VBP1P61758 AL355596.1-201ENST00000565399 3996 ntBASIC2.59□□□□□ -1.99
VBP1P61758 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VBP1P61758 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
VBP1P61758 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
VBP1P61758 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VBP1P61758 AL359837.1-201ENST00000381357 287 ntBASIC2.59□□□□□ -1.99
VBP1P61758 MIR512-1-201ENST00000384913 84 ntBASIC2.59□□□□□ -1.99
VBP1P61758 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
VBP1P61758 TAS2R15P-201ENST00000390674 928 ntBASIC2.59□□□□□ -1.99
VBP1P61758 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.59□□□□□ -1.99
VBP1P61758 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.59□□□□□ -1.99
VBP1P61758 AL606490.7-201ENST00000433136 191 ntBASIC2.59□□□□□ -1.99
VBP1P61758 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.59□□□□□ -1.99
VBP1P61758 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.59□□□□□ -1.99
VBP1P61758 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.59□□□□□ -1.99
VBP1P61758 AL162389.1-201ENST00000449233 177 ntBASIC2.59□□□□□ -1.99
VBP1P61758 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.59□□□□□ -1.99
VBP1P61758 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.59□□□□□ -1.99
VBP1P61758 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.59□□□□□ -1.99
VBP1P61758 AP005205.1-201ENST00000563503 508 ntBASIC2.59□□□□□ -1.99
VBP1P61758 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.59□□□□□ -1.99
VBP1P61758 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.59□□□□□ -1.99
VBP1P61758 AL162574.2-201ENST00000614618 657 ntBASIC2.59□□□□□ -1.99
VBP1P61758 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.59□□□□□ -2
VBP1P61758 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.59□□□□□ -2
VBP1P61758 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.59□□□□□ -2
VBP1P61758 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.58□□□□□ -2
VBP1P61758 AL035425.3-201ENST00000564206 4996 ntBASIC2.58□□□□□ -2
VBP1P61758 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.58□□□□□ -2
VBP1P61758 RNA5SP258-201ENST00000362750 119 ntBASIC2.58□□□□□ -2
VBP1P61758 SNORA25.6-201ENST00000364121 118 ntBASIC2.58□□□□□ -2
VBP1P61758 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.58□□□□□ -2
VBP1P61758 RNU6-98P-201ENST00000384173 107 ntBASIC2.58□□□□□ -2
VBP1P61758 MIR592-201ENST00000384959 97 ntBASIC2.58□□□□□ -2
VBP1P61758 RPL7P30-201ENST00000420888 709 ntBASIC2.58□□□□□ -2
VBP1P61758 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.58□□□□□ -2
VBP1P61758 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.58□□□□□ -2
VBP1P61758 AC127537.2-201ENST00000439258 465 ntBASIC2.58□□□□□ -2
VBP1P61758 AL645638.1-201ENST00000440519 361 ntBASIC2.58□□□□□ -2
VBP1P61758 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.58□□□□□ -2
VBP1P61758 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.58□□□□□ -2
VBP1P61758 RPS4XP6-201ENST00000477670 797 ntBASIC2.58□□□□□ -2
VBP1P61758 PRELID3BP6-201ENST00000503839 571 ntBASIC2.58□□□□□ -2
VBP1P61758 MTCO1P35-201ENST00000515270 228 ntBASIC2.58□□□□□ -2
VBP1P61758 MIR2116-201ENST00000517221 80 ntBASIC2.58□□□□□ -2
VBP1P61758 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.58□□□□□ -2
VBP1P61758 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.58□□□□□ -2
VBP1P61758 C1GALT1P3-201ENST00000522049 819 ntBASIC2.58□□□□□ -2
VBP1P61758 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.58□□□□□ -2
VBP1P61758 FAM60DP-201ENST00000524174 632 ntBASIC2.58□□□□□ -2
VBP1P61758 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
VBP1P61758 NOP56P3-201ENST00000549457 385 ntBASIC2.58□□□□□ -2
VBP1P61758 AC103810.1-201ENST00000579873 453 ntBASIC2.58□□□□□ -2
VBP1P61758 AC005046.1-201ENST00000608515 625 ntBASIC2.58□□□□□ -2
VBP1P61758 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.58□□□□□ -2
VBP1P61758 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
VBP1P61758 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.58□□□□□ -2
VBP1P61758 AC068880.5-201ENST00000624331 290 ntBASIC2.58□□□□□ -2
VBP1P61758 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.58□□□□□ -2
VBP1P61758 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms