Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC092170.1-201ENST00000440211 356 ntBASIC3.02□□□□□ -1.93
VSX2P58304 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.02□□□□□ -1.93
VSX2P58304 AL929288.2-201ENST00000446368 407 ntBASIC3.02□□□□□ -1.93
VSX2P58304 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.02□□□□□ -1.93
VSX2P58304 RPS15AP1-201ENST00000457423 391 ntBASIC3.02□□□□□ -1.93
VSX2P58304 RPS29P2-201ENST00000479278 136 ntBASIC3.02□□□□□ -1.93
VSX2P58304 RPS3AP43-201ENST00000479743 781 ntBASIC3.02□□□□□ -1.93
VSX2P58304 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.02□□□□□ -1.93
VSX2P58304 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VSX2P58304 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.02□□□□□ -1.93
VSX2P58304 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.02□□□□□ -1.93
VSX2P58304 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.02□□□□□ -1.93
VSX2P58304 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.02□□□□□ -1.93
VSX2P58304 SYF2P1-201ENST00000550658 413 ntBASIC3.02□□□□□ -1.93
VSX2P58304 AL163153.1-201ENST00000554223 283 ntBASIC3.02□□□□□ -1.93
VSX2P58304 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.02□□□□□ -1.93
VSX2P58304 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
VSX2P58304 UBL5P2-201ENST00000583788 219 ntBASIC3.02□□□□□ -1.93
VSX2P58304 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.02□□□□□ -1.93
VSX2P58304 PRELID3BP8-201ENST00000604148 295 ntBASIC3.02□□□□□ -1.93
VSX2P58304 AL451074.6-201ENST00000608512 729 ntBASIC3.02□□□□□ -1.93
VSX2P58304 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.02□□□□□ -1.93
VSX2P58304 AC100793.4-201ENST00000613683 429 ntBASIC3.02□□□□□ -1.93
VSX2P58304 AC105227.2-201ENST00000615075 605 ntBASIC3.02□□□□□ -1.93
VSX2P58304 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VSX2P58304 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
VSX2P58304 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.02□□□□□ -1.93
VSX2P58304 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VSX2P58304 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VSX2P58304 ELL2P4-201ENST00000446870 1376 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AC046144.1-201ENST00000478559 1853 ntBASIC3.01□□□□□ -1.93
VSX2P58304 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.01□□□□□ -1.93
VSX2P58304 MTND5P28-201ENST00000438005 1594 ntBASIC3.01□□□□□ -1.93
VSX2P58304 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.01□□□□□ -1.93
VSX2P58304 SNORA51.12-201ENST00000384448 134 ntBASIC3.01□□□□□ -1.93
VSX2P58304 RNU6-1151P-201ENST00000384684 107 ntBASIC3.01□□□□□ -1.93
VSX2P58304 MIR607-201ENST00000385241 96 ntBASIC3.01□□□□□ -1.93
VSX2P58304 GSTA8P-201ENST00000404253 637 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AL583834.1-201ENST00000406943 343 ntBASIC3.01□□□□□ -1.93
VSX2P58304 RNU6-77P-201ENST00000410554 91 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.01□□□□□ -1.93
VSX2P58304 AL024507.1-201ENST00000412741 274 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AC009237.2-201ENST00000421358 284 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AC244098.2-201ENST00000422068 99 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AC012498.1-201ENST00000424037 437 ntBASIC3.01□□□□□ -1.93
VSX2P58304 RPL7P46-201ENST00000425129 740 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AL009174.1-201ENST00000426577 416 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AL590103.1-201ENST00000434488 307 ntBASIC3.01□□□□□ -1.93
VSX2P58304 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.01□□□□□ -1.93
VSX2P58304 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.01□□□□□ -1.93
VSX2P58304 TRIM60P18-201ENST00000441518 828 ntBASIC3.01□□□□□ -1.93
VSX2P58304 GXYLT1P1-201ENST00000446657 490 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AL671855.1-201ENST00000446875 1203 ntBASIC3.01□□□□□ -1.93
VSX2P58304 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.01□□□□□ -1.93
VSX2P58304 Z99714.1-201ENST00000450463 807 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.01□□□□□ -1.93
VSX2P58304 ELOCP23-201ENST00000452014 332 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.01□□□□□ -1.93
VSX2P58304 ARPC3P2-201ENST00000457786 533 ntBASIC3.01□□□□□ -1.93
VSX2P58304 RPL7P5-201ENST00000471472 736 ntBASIC3.01□□□□□ -1.93
VSX2P58304 RPS4XP13-201ENST00000483219 789 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AC006445.1-201ENST00000491925 405 ntBASIC3.01□□□□□ -1.93
VSX2P58304 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VSX2P58304 MTND2P31-201ENST00000512602 616 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.01□□□□□ -1.93
VSX2P58304 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.01□□□□□ -1.93
VSX2P58304 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.01□□□□□ -1.93
VSX2P58304 OR6C73P-201ENST00000546432 358 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.01□□□□□ -1.93
VSX2P58304 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.01□□□□□ -1.93
VSX2P58304 AC005951.1-201ENST00000576706 485 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.01□□□□□ -1.93
VSX2P58304 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.01□□□□□ -1.93
VSX2P58304 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.01□□□□□ -1.93
VSX2P58304 AC112503.2-201ENST00000609005 552 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AC107294.3-201ENST00000609211 526 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AL512506.1-201ENST00000613918 449 ntBASIC3.01□□□□□ -1.93
VSX2P58304 MIR8084-201ENST00000614105 89 ntBASIC3.01□□□□□ -1.93
VSX2P58304 AC099506.2-201ENST00000623074 221 ntBASIC3.01□□□□□ -1.93
VSX2P58304 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.01□□□□□ -1.93
VSX2P58304 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.01□□□□□ -1.93
VSX2P58304 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
VSX2P58304 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.01□□□□□ -1.93
VSX2P58304 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VSX2P58304 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VSX2P58304 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
VSX2P58304 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3□□□□□ -1.93
VSX2P58304 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
VSX2P58304 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3□□□□□ -1.93
VSX2P58304 RNU6-629P-201ENST00000384061 103 ntBASIC3□□□□□ -1.93
VSX2P58304 SNORA48.2-201ENST00000390926 124 ntBASIC3□□□□□ -1.93
VSX2P58304 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3□□□□□ -1.93
VSX2P58304 HMGB3P23-201ENST00000414981 585 ntBASIC3□□□□□ -1.93
VSX2P58304 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3□□□□□ -1.93
VSX2P58304 AC246680.2-201ENST00000422106 389 ntBASIC3□□□□□ -1.93
VSX2P58304 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3□□□□□ -1.93
VSX2P58304 HSFY1P1-201ENST00000423928 1178 ntBASIC3□□□□□ -1.93
VSX2P58304 MTCO2P1-201ENST00000424648 477 ntBASIC3□□□□□ -1.93
VSX2P58304 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3□□□□□ -1.93
VSX2P58304 AC011242.1-201ENST00000433596 1158 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms