Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH13P55290 TXNL1P1-201ENST00000429528 554 ntBASIC3.74□□□□□ -1.81
CDH13P55290 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH13P55290 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH13P55290 Z74696.2-201ENST00000436514 498 ntBASIC3.74□□□□□ -1.81
CDH13P55290 MUPP-201ENST00000438111 566 ntBASIC3.74□□□□□ -1.81
CDH13P55290 AL008629.1-201ENST00000438615 184 ntBASIC3.74□□□□□ -1.81
CDH13P55290 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH13P55290 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH13P55290 AC098824.1-201ENST00000453565 980 ntBASIC3.74□□□□□ -1.81
CDH13P55290 MTCO3P20-201ENST00000454926 688 ntBASIC3.74□□□□□ -1.81
CDH13P55290 DNAJC19P1-201ENST00000455312 319 ntBASIC3.74□□□□□ -1.81
CDH13P55290 RPL21P11-201ENST00000461458 483 ntBASIC3.74□□□□□ -1.81
CDH13P55290 AP001992.1-205ENST00000462248 379 ntBASIC3.74□□□□□ -1.81
CDH13P55290 AC084198.1-201ENST00000477747 402 ntBASIC3.74□□□□□ -1.81
CDH13P55290 AC004263.1-201ENST00000479327 332 ntBASIC3.74□□□□□ -1.81
CDH13P55290 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.74□□□□□ -1.81
CDH13P55290 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH13P55290 AC093281.2-201ENST00000510153 597 ntBASIC3.74□□□□□ -1.81
CDH13P55290 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.74□□□□□ -1.81
CDH13P55290 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH13P55290 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH13P55290 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH13P55290 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.74□□□□□ -1.81
CDH13P55290 AC099489.2-201ENST00000574976 260 ntBASIC3.74□□□□□ -1.81
CDH13P55290 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
CDH13P55290 AL596327.1-201ENST00000603629 213 ntBASIC3.74□□□□□ -1.81
CDH13P55290 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH13P55290 AC009464.1-201ENST00000615731 469 ntBASIC3.74□□□□□ -1.81
CDH13P55290 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH13P55290 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CDH13P55290 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH13P55290 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CDH13P55290 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH13P55290 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH13P55290 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH13P55290 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH13P55290 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH13P55290 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.73□□□□□ -1.81
CDH13P55290 AL049780.3-201ENST00000624612 1583 ntBASIC3.73□□□□□ -1.81
CDH13P55290 AL121657.1-201ENST00000327215 531 ntBASIC3.73□□□□□ -1.81
CDH13P55290 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CDH13P55290 OR5H2-201ENST00000355273 945 ntBASIC3.73□□□□□ -1.81
CDH13P55290 SNORA31-201ENST00000362607 130 ntBASIC3.73□□□□□ -1.81
CDH13P55290 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH13P55290 MIR199A2-201ENST00000385289 110 ntBASIC3.73□□□□□ -1.81
CDH13P55290 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH13P55290 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH13P55290 AL031679.1-201ENST00000400616 525 ntBASIC3.73□□□□□ -1.81
CDH13P55290 RPL21P65-201ENST00000406094 466 ntBASIC3.73□□□□□ -1.81
CDH13P55290 Y_RNA.625-201ENST00000411256 107 ntBASIC3.73□□□□□ -1.81
CDH13P55290 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH13P55290 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH13P55290 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH13P55290 AL590233.1-201ENST00000430017 456 ntBASIC3.73□□□□□ -1.81
CDH13P55290 ZYG11AP1-201ENST00000430329 837 ntBASIC3.73□□□□□ -1.81
CDH13P55290 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH13P55290 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH13P55290 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH13P55290 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH13P55290 MTCYBP31-201ENST00000438855 1122 ntBASIC3.73□□□□□ -1.81
CDH13P55290 SNORA71B-202ENST00000439232 272 ntBASIC3.73□□□□□ -1.81
CDH13P55290 MTCYBP34-201ENST00000439552 670 ntBASIC3.73□□□□□ -1.81
CDH13P55290 AC005297.2-201ENST00000450430 606 ntBASIC3.73□□□□□ -1.81
CDH13P55290 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH13P55290 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH13P55290 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH13P55290 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH13P55290 AL109741.2-201ENST00000455561 343 ntBASIC3.73□□□□□ -1.81
CDH13P55290 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH13P55290 AC110792.1-201ENST00000491826 472 ntBASIC3.73□□□□□ -1.81
CDH13P55290 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH13P55290 AC147055.4-201ENST00000504399 745 ntBASIC3.73□□□□□ -1.81
CDH13P55290 AC098862.1-201ENST00000504991 413 ntBASIC3.73□□□□□ -1.81
CDH13P55290 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH13P55290 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH13P55290 RAC1P2-201ENST00000511164 579 ntBASIC3.73□□□□□ -1.81
CDH13P55290 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.73□□□□□ -1.81
CDH13P55290 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CDH13P55290 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH13P55290 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH13P55290 AP004371.1-201ENST00000525240 214 ntBASIC3.73□□□□□ -1.81
CDH13P55290 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.73□□□□□ -1.81
CDH13P55290 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH13P55290 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH13P55290 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH13P55290 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH13P55290 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH13P55290 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH13P55290 MIR4999-201ENST00000585029 91 ntBASIC3.73□□□□□ -1.81
CDH13P55290 AC128687.1-201ENST00000605304 619 ntBASIC3.73□□□□□ -1.81
CDH13P55290 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH13P55290 AL139418.1-201ENST00000613613 177 ntBASIC3.73□□□□□ -1.81
CDH13P55290 AC079684.1-201ENST00000621405 437 ntBASIC3.73□□□□□ -1.81
CDH13P55290 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH13P55290 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH13P55290 AL365440.1-201ENST00000436135 2167 ntBASIC3.73□□□□□ -1.81
CDH13P55290 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH13P55290 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH13P55290 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms