Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH11P55287 PIGPP4-201ENST00000584447 307 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH11P55287 YWHAQP7-201ENST00000603536 658 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AL596327.1-201ENST00000603629 213 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AL031667.3-201ENST00000620124 655 ntBASIC3.64□□□□□ -1.83
CDH11P55287 AC010608.2-201ENST00000624830 470 ntBASIC3.64□□□□□ -1.83
CDH11P55287 PCMTD1P7-201ENST00000634506 357 ntBASIC3.64□□□□□ -1.83
CDH11P55287 UBE3AP2-201ENST00000429033 2259 ntBASIC3.64□□□□□ -1.83
CDH11P55287 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH11P55287 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH11P55287 MTCO1P14-201ENST00000441695 1559 ntBASIC3.63□□□□□ -1.83
CDH11P55287 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH11P55287 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH11P55287 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH11P55287 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH11P55287 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH11P55287 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH11P55287 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH11P55287 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH11P55287 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDH11P55287 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDH11P55287 RNA5SP130-201ENST00000364431 114 ntBASIC3.63□□□□□ -1.83
CDH11P55287 RNU6-730P-201ENST00000383954 104 ntBASIC3.63□□□□□ -1.83
CDH11P55287 SKINT1L-201ENST00000401057 817 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AL024474.1-201ENST00000404655 591 ntBASIC3.63□□□□□ -1.83
CDH11P55287 RPL21P65-201ENST00000406094 466 ntBASIC3.63□□□□□ -1.83
CDH11P55287 RN7SKP177-201ENST00000410567 355 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH11P55287 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH11P55287 AC019178.2-201ENST00000423595 505 ntBASIC3.63□□□□□ -1.83
CDH11P55287 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH11P55287 AL117339.2-201ENST00000430475 180 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH11P55287 EEF1E1P1-201ENST00000446998 430 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AL162151.2-201ENST00000448875 158 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH11P55287 OR6C5P-201ENST00000452388 923 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AC073387.1-201ENST00000453261 709 ntBASIC3.63□□□□□ -1.83
CDH11P55287 RPL5P32-201ENST00000454085 879 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AC026410.2-201ENST00000460281 156 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AC097493.1-201ENST00000463958 372 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH11P55287 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH11P55287 AC104685.1-201ENST00000502445 371 ntBASIC3.63□□□□□ -1.83
CDH11P55287 BTF3L4P4-201ENST00000506381 449 ntBASIC3.63□□□□□ -1.83
CDH11P55287 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.63□□□□□ -1.83
CDH11P55287 OR5BM1P-201ENST00000512021 366 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.63□□□□□ -1.83
CDH11P55287 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDH11P55287 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.63□□□□□ -1.83
CDH11P55287 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH11P55287 AC008127.2-201ENST00000549925 1075 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH11P55287 AC136618.2-201ENST00000575091 400 ntBASIC3.63□□□□□ -1.83
CDH11P55287 RN7SL600P-201ENST00000581811 299 ntBASIC3.63□□□□□ -1.83
CDH11P55287 MIR5684-201ENST00000585074 65 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AL109618.2-201ENST00000605527 211 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AP003117.2-201ENST00000606010 545 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.63□□□□□ -1.83
CDH11P55287 AL161637.1-201ENST00000622380 412 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AC091965.5-201ENST00000624785 342 ntBASIC3.63□□□□□ -1.83
CDH11P55287 RNA5SP196-201ENST00000625967 102 ntBASIC3.63□□□□□ -1.83
CDH11P55287 AP003399.1-201ENST00000637534 361 ntBASIC3.63□□□□□ -1.83
CDH11P55287 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDH11P55287 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH11P55287 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH11P55287 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH11P55287 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CDH11P55287 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH11P55287 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH11P55287 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CDH11P55287 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CDH11P55287 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH11P55287 MIR372-201ENST00000362225 67 ntBASIC3.62□□□□□ -1.83
CDH11P55287 RNU11-4P-201ENST00000391149 133 ntBASIC3.62□□□□□ -1.83
CDH11P55287 DHFRP6-201ENST00000401776 268 ntBASIC3.62□□□□□ -1.83
CDH11P55287 AL031577.2-201ENST00000404133 280 ntBASIC3.62□□□□□ -1.83
CDH11P55287 PPIAP31-201ENST00000405422 495 ntBASIC3.62□□□□□ -1.83
CDH11P55287 MIR1302-8-201ENST00000408342 128 ntBASIC3.62□□□□□ -1.83
CDH11P55287 AL356095.1-201ENST00000417217 199 ntBASIC3.62□□□□□ -1.83
CDH11P55287 AL365338.1-201ENST00000422282 858 ntBASIC3.62□□□□□ -1.83
CDH11P55287 AL358472.1-201ENST00000431295 329 ntBASIC3.62□□□□□ -1.83
CDH11P55287 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH11P55287 UBE2D3P4-201ENST00000441973 436 ntBASIC3.62□□□□□ -1.83
CDH11P55287 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.62□□□□□ -1.83
CDH11P55287 MTND2P4-201ENST00000445034 1004 ntBASIC3.62□□□□□ -1.83
CDH11P55287 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH11P55287 RNA5SP246-201ENST00000458909 119 ntBASIC3.62□□□□□ -1.83
CDH11P55287 RPL7P1-201ENST00000468161 747 ntBASIC3.62□□□□□ -1.83
CDH11P55287 RPL7P9-201ENST00000468715 747 ntBASIC3.62□□□□□ -1.83
CDH11P55287 SYPL1P1-201ENST00000473622 768 ntBASIC3.62□□□□□ -1.83
CDH11P55287 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH11P55287 RN7SL604P-201ENST00000492589 296 ntBASIC3.62□□□□□ -1.83
CDH11P55287 AC114981.1-201ENST00000503897 678 ntBASIC3.62□□□□□ -1.83
CDH11P55287 HIGD1AP3-201ENST00000515857 278 ntBASIC3.62□□□□□ -1.83
CDH11P55287 RNU6-678P-201ENST00000516832 109 ntBASIC3.62□□□□□ -1.83
CDH11P55287 RN7SKP234-201ENST00000517173 224 ntBASIC3.62□□□□□ -1.83
CDH11P55287 HSPA8P13-201ENST00000523715 472 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 316.7 ms