Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 MTCO2P23-201ENST00000425216 680 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 OSTCP5-201ENST00000425293 453 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 AL606517.1-201ENST00000446914 387 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 DUXAP8-207ENST00000456786 622 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 AC093767.1-201ENST00000504523 156 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 AC091163.3-201ENST00000518269 1144 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 AP004371.1-201ENST00000525240 214 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 MTCYBP41-201ENST00000528913 1123 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 AC090502.2-201ENST00000549267 280 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 AC008127.2-201ENST00000549925 1075 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 CBX3P5-201ENST00000552017 521 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 MIR3912-201ENST00000577566 105 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 VN1R92P-201ENST00000598511 928 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 DUXAP10-204ENST00000612052 616 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFRSF4P43489 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TNFRSF4P43489 AL645937.1-201ENST00000641739 1652 ntBASIC3.52□□□□□ -1.85
TNFRSF4P43489 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFRSF4P43489 Z83843.1-201ENST00000604070 3685 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AP005901.5-201ENST00000545779 1796 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 RNA5SP502-201ENST00000362694 119 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 RNA5SP42-201ENST00000364278 115 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 SNORA51.6-201ENST00000384151 125 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 MIR3074-201ENST00000384885 81 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 MIR607-201ENST00000385241 96 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AL138880.1-201ENST00000405824 642 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 RPL23AP47-201ENST00000408017 460 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 RNU6-584P-201ENST00000410350 95 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 BX323014.1-201ENST00000412876 237 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 Z75741.2-201ENST00000417272 1167 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC106883.1-201ENST00000418805 562 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 FNDC3CP-201ENST00000420795 1155 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC006989.1-201ENST00000427212 131 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 GTF2IP7-202ENST00000436677 309 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC127537.2-201ENST00000439258 465 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 HMGB3P6-201ENST00000444896 598 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AL358794.1-201ENST00000445689 381 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 PABPC1P3-201ENST00000469174 459 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC092045.1-201ENST00000495716 1231 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC139783.2-201ENST00000504847 1145 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 VWA8P1-201ENST00000510889 176 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 SCARNA13-201ENST00000516672 275 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 OR5D17P-201ENST00000531492 978 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 MIR4760-201ENST00000585040 80 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC011471.1-201ENST00000585766 187 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC007687.1-201ENST00000602704 304 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AL035411.2-201ENST00000604022 421 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC091946.2-201ENST00000606105 291 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC034229.4-201ENST00000607861 441 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 PART1_2.1-201ENST00000612397 250 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC008083.4-201ENST00000615076 444 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 uc_338.32-201ENST00000615087 172 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 MIR7112-201ENST00000616126 65 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC231759.1-201ENST00000616455 597 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC091046.2-201ENST00000620775 665 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 AC103858.2-201ENST00000621471 543 ntBASIC3.51□□□□□ -1.85
TNFRSF4P43489 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.51□□□□□ -1.85
TNFRSF4P43489 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TNFRSF4P43489 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TNFRSF4P43489 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TNFRSF4P43489 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TNFRSF4P43489 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TNFRSF4P43489 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TNFRSF4P43489 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TNFRSF4P43489 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 MIR634-201ENST00000385208 97 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 MTCO2P8-201ENST00000412213 658 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 OR4K6P-201ENST00000416478 897 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC007435.1-201ENST00000421086 415 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms