Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HOXD13P35453 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HOXD13P35453 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
HOXD13P35453 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD13P35453 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD13P35453 MFSD8-236ENST00000641509 4050 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD13P35453 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
HOXD13P35453 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD13P35453 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD13P35453 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD13P35453 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXD13P35453 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXD13P35453 RNU6-629P-201ENST00000384061 103 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXD13P35453 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXD13P35453 RNU6-712P-201ENST00000410558 100 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 RNU2-71P-201ENST00000411395 189 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HOXD13P35453 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXD13P35453 AC006960.1-201ENST00000419980 153 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 AC099677.1-201ENST00000420575 175 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD13P35453 MTND3P1-201ENST00000441336 220 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 HMGB1P25-201ENST00000468402 607 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD13P35453 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXD13P35453 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD13P35453 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXD13P35453 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXD13P35453 MTCO2P15-201ENST00000532655 656 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD13P35453 MTND1P24-201ENST00000552175 861 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.08□□□□□ -1.76
HOXD13P35453 AC106785.1-201ENST00000565935 262 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 MIR5187-201ENST00000583479 76 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 AC061975.8-201ENST00000587058 721 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 AC080013.3-201ENST00000606839 578 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD13P35453 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HOXD13P35453 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.08□□□□□ -1.76
HOXD13P35453 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD13P35453 AC010300.1-201ENST00000600671 5134 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD13P35453 AC106871.1-201ENST00000568324 3102 ntBASIC4.08□□□□□ -1.76
HOXD13P35453 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD13P35453 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXD13P35453 AP000776.1-201ENST00000530032 1663 ntBASIC4.07□□□□□ -1.76
HOXD13P35453 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXD13P35453 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD13P35453 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD13P35453 AC073073.2-201ENST00000609827 2578 ntBASIC4.07□□□□□ -1.76
HOXD13P35453 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXD13P35453 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD13P35453 VDAC1P3-201ENST00000434069 851 ntBASIC4.07□□□□□ -1.76
HOXD13P35453 MTND4LP10-201ENST00000435146 291 ntBASIC4.07□□□□□ -1.76
HOXD13P35453 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.07□□□□□ -1.76
HOXD13P35453 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD13P35453 AC006480.1-201ENST00000449887 378 ntBASIC4.07□□□□□ -1.76
HOXD13P35453 snoU13.24-201ENST00000458998 104 ntBASIC4.07□□□□□ -1.76
HOXD13P35453 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD13P35453 COX7A2P2-201ENST00000505291 250 ntBASIC4.07□□□□□ -1.76
HOXD13P35453 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD13P35453 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXD13P35453 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXD13P35453 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXD13P35453 RNY4P37-201ENST00000516225 96 ntBASIC4.07□□□□□ -1.76
HOXD13P35453 RN7SKP209-201ENST00000516888 304 ntBASIC4.07□□□□□ -1.76
HOXD13P35453 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HOXD13P35453 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD13P35453 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.07□□□□□ -1.76
HOXD13P35453 AC023050.2-201ENST00000544968 387 ntBASIC4.07□□□□□ -1.76
HOXD13P35453 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD13P35453 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXD13P35453 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.07□□□□□ -1.76
HOXD13P35453 uc_338.32-201ENST00000615087 172 ntBASIC4.07□□□□□ -1.76
HOXD13P35453 CRYM-AS1-204ENST00000637983 556 ntBASIC4.07□□□□□ -1.76
HOXD13P35453 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD13P35453 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD13P35453 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HOXD13P35453 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXD13P35453 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXD13P35453 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD13P35453 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
HOXD13P35453 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD13P35453 RPL32P23-201ENST00000397237 405 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 AL031679.1-201ENST00000400616 525 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HOXD13P35453 AL590233.1-201ENST00000430017 456 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 AC005297.2-201ENST00000450430 606 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 NECAP1P2-201ENST00000455668 727 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 VN1R17P-201ENST00000472048 1090 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 AC093267.1-201ENST00000489176 961 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 HMGB1P22-201ENST00000505315 124 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 AC008489.1-201ENST00000524271 483 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 AP001372.4-201ENST00000524889 472 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 AC024224.1-201ENST00000538284 609 ntBASIC4.06□□□□□ -1.76
HOXD13P35453 AC091515.1-201ENST00000548110 679 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms