Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC009812.2-201ENST00000517657 457 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 AP003717.3-201ENST00000544832 1180 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA9P31269 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA9P31269 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA9P31269 AC074029.1-201ENST00000552531 1044 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA9P31269 AC104229.1-201ENST00000561364 255 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA9P31269 AC090079.2-201ENST00000575289 768 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HOXA9P31269 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA9P31269 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 PRELID3BP8-201ENST00000604148 295 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 AC024023.1-201ENST00000624530 922 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA9P31269 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA9P31269 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA9P31269 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HOXA9P31269 MTND5P11-201ENST00000511037 1812 ntBASIC3.26□□□□□ -1.89
HOXA9P31269 AC116096.1-201ENST00000566804 2314 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HOXA9P31269 RPL7P26-201ENST00000333817 754 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HOXA9P31269 SKINT1L-201ENST00000401057 817 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 ATF1P1-201ENST00000406040 927 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 RNA5SP293-201ENST00000410527 113 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 AL445183.3-201ENST00000414168 502 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA9P31269 RPS15AP6-201ENST00000420703 385 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 TRIAP1P1-201ENST00000427062 225 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 AC005189.1-201ENST00000431286 310 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXA9P31269 AC108734.1-201ENST00000439549 399 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXA9P31269 AC005002.1-201ENST00000447458 540 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 RPL7P52-201ENST00000449200 742 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 BX276092.4-201ENST00000452056 248 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA9P31269 AP002884.2-201ENST00000471647 395 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 AC004924.1-201ENST00000480160 781 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA9P31269 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXA9P31269 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXA9P31269 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA9P31269 AF279873.1-201ENST00000523393 313 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HOXA9P31269 OR5AK3P-201ENST00000527486 1297 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXA9P31269 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HOXA9P31269 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXA9P31269 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA9P31269 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA9P31269 MIR3908-201ENST00000579798 126 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA9P31269 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXA9P31269 ZNF92P3-201ENST00000596594 954 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXA9P31269 AC018618.2-201ENST00000604770 446 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 AC084824.5-201ENST00000612009 413 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 MIR8084-201ENST00000614105 89 ntBASIC3.25□□□□□ -1.89
HOXA9P31269 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.25□□□□□ -1.89
HOXA9P31269 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXA9P31269 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA9P31269 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HOXA9P31269 AF117829.1-206ENST00000621883 3802 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 MFSD8-213ENST00000641134 1327 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HOXA9P31269 AC110774.1-201ENST00000623567 2018 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA9P31269 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXA9P31269 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXA9P31269 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXA9P31269 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA9P31269 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA9P31269 SNORA5B-201ENST00000363786 132 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 RNU6-98P-201ENST00000384173 107 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXA9P31269 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA9P31269 OR51AB1P-201ENST00000429046 620 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 AL139132.1-201ENST00000431587 344 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXA9P31269 HIGD1AP11-201ENST00000438361 280 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 AC097499.1-201ENST00000444277 208 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 AC112492.1-201ENST00000449607 712 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXA9P31269 AC015908.1-201ENST00000478739 476 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.24□□□□□ -1.89
HOXA9P31269 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXA9P31269 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXA9P31269 TMEM248P1-201ENST00000510579 951 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 MTCO2P32-201ENST00000514865 403 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXA9P31269 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXA9P31269 MTCYBP41-201ENST00000528913 1123 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 AP002812.4-201ENST00000532139 286 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 AC092451.2-201ENST00000538746 658 ntBASIC3.24□□□□□ -1.89
HOXA9P31269 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms