Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RPL7P46-201ENST00000425129 740 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 AC138761.5-201ENST00000433967 325 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 MED28P3-201ENST00000444288 531 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 AC016696.1-201ENST00000446949 318 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 SNORD121B-201ENST00000458838 81 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.7□□□□□ -1.5
NFKB1P19838 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.7□□□□□ -1.5
NFKB1P19838 AC079600.1-201ENST00000550326 297 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.7□□□□□ -1.5
NFKB1P19838 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.7□□□□□ -1.5
NFKB1P19838 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NFKB1P19838 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.7□□□□□ -1.5
NFKB1P19838 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.7□□□□□ -1.5
NFKB1P19838 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.7□□□□□ -1.5
NFKB1P19838 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.7□□□□□ -1.5
NFKB1P19838 PISRT1.1-201ENST00000616930 107 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.7□□□□□ -1.5
NFKB1P19838 AL353662.3-201ENST00000625131 237 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
NFKB1P19838 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.7□□□□□ -1.5
NFKB1P19838 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NFKB1P19838 TPTE2P4-201ENST00000258589 1605 ntBASIC5.7□□□□□ -1.5
NFKB1P19838 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NFKB1P19838 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NFKB1P19838 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NFKB1P19838 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NFKB1P19838 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NFKB1P19838 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.69□□□□□ -1.5
NFKB1P19838 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NFKB1P19838 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
NFKB1P19838 AC016745.2-201ENST00000608834 3443 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AC125336.1-201ENST00000508893 2827 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NFKB1P19838 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.69□□□□□ -1.5
NFKB1P19838 RNU6-1287P-201ENST00000362914 107 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 RNA5SP131-201ENST00000365452 119 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 RNU6-1293P-201ENST00000384077 107 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 SNORA24.1-201ENST00000384401 135 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 RNU6-1060P-201ENST00000384664 107 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 Y_RNA.645-201ENST00000391229 102 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 RNU2-36P-201ENST00000410361 191 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AC069218.2-201ENST00000411665 344 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.69□□□□□ -1.5
NFKB1P19838 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.69□□□□□ -1.5
NFKB1P19838 BX276092.6-201ENST00000430476 250 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.69□□□□□ -1.5
NFKB1P19838 LINC02210-201ENST00000444561 288 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NFKB1P19838 AL596266.1-201ENST00000448132 400 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AL162388.1-201ENST00000450912 352 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AL445665.1-202ENST00000452436 324 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 BX276092.8-201ENST00000455722 250 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AC006967.1-201ENST00000467608 589 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AC094085.1-201ENST00000468914 584 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.69□□□□□ -1.5
NFKB1P19838 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.69□□□□□ -1.5
NFKB1P19838 AC116655.1-201ENST00000508324 901 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AC116337.1-201ENST00000509680 687 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 HIGD1AP13-201ENST00000509878 289 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AC097486.1-201ENST00000515331 210 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 RNU6-347P-201ENST00000516658 105 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.69□□□□□ -1.5
NFKB1P19838 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.69□□□□□ -1.5
NFKB1P19838 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.69□□□□□ -1.5
NFKB1P19838 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.69□□□□□ -1.5
NFKB1P19838 AL121612.2-201ENST00000612261 482 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 DUSP12P1-201ENST00000612874 516 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 RNU6-156P-201ENST00000621869 107 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AC055839.1-201ENST00000634467 498 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 MIR1910-201ENST00000636955 80 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 AL732372.2-225ENST00000642124 456 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NFKB1P19838 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NFKB1P19838 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NFKB1P19838 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.69□□□□□ -1.5
NFKB1P19838 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NFKB1P19838 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.69□□□□□ -1.5
NFKB1P19838 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NFKB1P19838 AL158163.1-201ENST00000603915 1649 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 PROS2P-201ENST00000474651 1951 ntBASIC5.69□□□□□ -1.5
NFKB1P19838 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NFKB1P19838 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.69□□□□□ -1.5
NFKB1P19838 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.68□□□□□ -1.5
NFKB1P19838 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NFKB1P19838 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
NFKB1P19838 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.68□□□□□ -1.5
NFKB1P19838 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NFKB1P19838 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NFKB1P19838 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NFKB1P19838 RNU5E-6P-201ENST00000365574 115 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NFKB1P19838 MIR621-201ENST00000384919 96 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NFKB1P19838 MIR450B-201ENST00000401182 78 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 NDUFS5P1-201ENST00000405668 289 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 AL009179.1-201ENST00000406085 265 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 RPL7P10-201ENST00000417407 739 ntBASIC5.68□□□□□ -1.5
NFKB1P19838 AC008267.5-201ENST00000424928 265 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms