Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 APOOP2-201ENST00000461561 539 ntBASIC5□□□□□ -1.61
PTPN1P18031 RPL23AP72-201ENST00000492447 435 ntBASIC5□□□□□ -1.61
PTPN1P18031 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5□□□□□ -1.61
PTPN1P18031 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5□□□□□ -1.61
PTPN1P18031 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5□□□□□ -1.61
PTPN1P18031 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5□□□□□ -1.61
PTPN1P18031 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5□□□□□ -1.61
PTPN1P18031 MTCO1P35-201ENST00000515270 228 ntBASIC5□□□□□ -1.61
PTPN1P18031 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5□□□□□ -1.61
PTPN1P18031 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5□□□□□ -1.61
PTPN1P18031 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5□□□□□ -1.61
PTPN1P18031 AC009101.1-201ENST00000568135 242 ntBASIC5□□□□□ -1.61
PTPN1P18031 AC053481.3-201ENST00000577881 843 ntBASIC5□□□□□ -1.61
PTPN1P18031 RN7SL690P-201ENST00000582087 240 ntBASIC5□□□□□ -1.61
PTPN1P18031 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5□□□□□ -1.61
PTPN1P18031 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5□□□□□ -1.61
PTPN1P18031 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5□□□□□ -1.61
PTPN1P18031 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5□□□□□ -1.61
PTPN1P18031 AL162413.1-201ENST00000603198 110 ntBASIC5□□□□□ -1.61
PTPN1P18031 AC007621.1-201ENST00000604544 437 ntBASIC5□□□□□ -1.61
PTPN1P18031 AC016727.1-205ENST00000605437 569 ntBASIC5□□□□□ -1.61
PTPN1P18031 AC093788.1-201ENST00000609356 927 ntBASIC5□□□□□ -1.61
PTPN1P18031 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5□□□□□ -1.61
PTPN1P18031 AP001005.3-201ENST00000622049 129 ntBASIC5□□□□□ -1.61
PTPN1P18031 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5□□□□□ -1.61
PTPN1P18031 MFSD8-216ENST00000641147 4009 ntBASIC5□□□□□ -1.61
PTPN1P18031 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
PTPN1P18031 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5□□□□□ -1.61
PTPN1P18031 AC097714.1-201ENST00000511272 1647 ntBASIC5□□□□□ -1.61
PTPN1P18031 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTPN1P18031 NUP58P1-201ENST00000502546 1738 ntBASIC5□□□□□ -1.61
PTPN1P18031 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTPN1P18031 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN1P18031 AC126323.6-202ENST00000568092 3511 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTPN1P18031 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN1P18031 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN1P18031 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PTPN1P18031 RNU5E-1-201ENST00000362477 120 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 Y_RNA.159-201ENST00000363674 87 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 RNA5SP505-201ENST00000364748 108 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 RNU6-398P-201ENST00000384143 109 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 AL356421.1-201ENST00000403255 413 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 BTBD10P2-201ENST00000404779 676 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 RPL36AP36-201ENST00000418616 301 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 RPL31P45-201ENST00000419532 356 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 AC099336.2-201ENST00000422457 254 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 CKS1BP6-201ENST00000424932 240 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN1P18031 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN1P18031 HMGB3P12-201ENST00000438745 556 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 CALM1P1-201ENST00000442082 433 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 AC011753.3-201ENST00000443436 406 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 H2AFZP6-201ENST00000444403 394 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 CEACAMP6-201ENST00000452007 574 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 HMGB1P15-201ENST00000453854 435 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN1P18031 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.99□□□□□ -1.61
PTPN1P18031 AP1S2P1-201ENST00000457344 379 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 AC099560.2-201ENST00000457554 255 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 RN7SL354P-201ENST00000469282 294 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 AL136126.1-201ENST00000473603 402 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 HMGN1P12-201ENST00000499125 195 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN1P18031 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.99□□□□□ -1.61
PTPN1P18031 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.99□□□□□ -1.61
PTPN1P18031 AC114786.4-201ENST00000508771 728 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN1P18031 LRRC34P2-201ENST00000514850 553 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.99□□□□□ -1.61
PTPN1P18031 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN1P18031 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN1P18031 RN7SL52P-201ENST00000584271 284 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 uc_338.18-201ENST00000615451 175 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 RN7SL722P-201ENST00000617780 284 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 RN7SL565P-201ENST00000618246 284 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN1P18031 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.99□□□□□ -1.61
PTPN1P18031 FER-210ENST00000628534 558 ntTSL 5 BASIC4.99□□□□□ -1.61
PTPN1P18031 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN1P18031 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN1P18031 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTPN1P18031 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN1P18031 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN1P18031 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
PTPN1P18031 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.99□□□□□ -1.61
PTPN1P18031 AL445487.1-201ENST00000415694 1580 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 AP000756.2-201ENST00000624168 2567 ntBASIC4.99□□□□□ -1.61
PTPN1P18031 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PTPN1P18031 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN1P18031 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN1P18031 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN1P18031 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN1P18031 AC083843.3-201ENST00000623679 2186 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PTPN1P18031 AL136164.3-201ENST00000624429 3978 ntBASIC4.98□□□□□ -1.61
PTPN1P18031 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
PTPN1P18031 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms