Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SNORA51.4-201ENST00000364993 124 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 RNA5SP129-201ENST00000410276 118 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 RAP1BP1-201ENST00000412709 553 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL11A1P12107 MRPS33P4-201ENST00000434892 317 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.77□□□□□ -1.97
COL11A1P12107 FAM103A2P-201ENST00000444122 354 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 AC104389.3-201ENST00000445629 235 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 VN1R17P-201ENST00000472048 1090 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 RPL23AP11-201ENST00000475260 469 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.77□□□□□ -1.97
COL11A1P12107 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.77□□□□□ -1.97
COL11A1P12107 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL11A1P12107 AC067852.7-201ENST00000623270 535 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 PNPT1P2-201ENST00000456768 2050 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
COL11A1P12107 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.77□□□□□ -1.97
COL11A1P12107 RNU4-53P-201ENST00000410828 140 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 RN7SKP140-201ENST00000411196 284 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 MTND4LP13-201ENST00000425022 298 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 SEC63P1-201ENST00000425785 1258 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 AL606490.7-201ENST00000433136 191 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL11A1P12107 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.77□□□□□ -1.97
COL11A1P12107 IFNA11P-201ENST00000446352 526 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 AL353705.4-201ENST00000449661 238 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 EIF2S2P4-201ENST00000461070 984 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 RPL21P71-201ENST00000465598 459 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
COL11A1P12107 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.77□□□□□ -1.97
COL11A1P12107 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.77□□□□□ -1.97
COL11A1P12107 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.77□□□□□ -1.97
COL11A1P12107 CKS1BP1-201ENST00000555221 240 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 AC078899.3-201ENST00000599065 212 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 AC107871.2-201ENST00000612894 502 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 AC116447.1-201ENST00000613153 453 ntBASIC2.77□□□□□ -1.97
COL11A1P12107 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.77□□□□□ -1.97
COL11A1P12107 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL11A1P12107 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL11A1P12107 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL11A1P12107 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL11A1P12107 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.76□□□□□ -1.97
COL11A1P12107 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
COL11A1P12107 RNU6-1331P-201ENST00000363658 106 ntBASIC2.76□□□□□ -1.97
COL11A1P12107 AC007064.1-201ENST00000412238 351 ntBASIC2.76□□□□□ -1.97
COL11A1P12107 AL513477.1-202ENST00000417061 214 ntBASIC2.76□□□□□ -1.97
COL11A1P12107 RAB9AP5-201ENST00000437794 597 ntBASIC2.76□□□□□ -1.97
COL11A1P12107 RAB9AP2-201ENST00000443911 597 ntBASIC2.76□□□□□ -1.97
COL11A1P12107 RPL36AP51-201ENST00000487216 318 ntBASIC2.76□□□□□ -1.97
COL11A1P12107 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL11A1P12107 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.76□□□□□ -1.97
COL11A1P12107 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.76□□□□□ -1.97
COL11A1P12107 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.76□□□□□ -1.97
COL11A1P12107 AC010928.3-201ENST00000587712 541 ntBASIC2.76□□□□□ -1.97
COL11A1P12107 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.76□□□□□ -1.97
COL11A1P12107 AC009318.3-201ENST00000616916 503 ntBASIC2.76□□□□□ -1.97
COL11A1P12107 AC000123.2-201ENST00000623124 461 ntBASIC2.76□□□□□ -1.97
COL11A1P12107 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL11A1P12107 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
COL11A1P12107 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL11A1P12107 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
COL11A1P12107 RNU4-26P-201ENST00000410270 107 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 BX276092.3-201ENST00000424182 230 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 HIGD1AP2-201ENST00000446367 280 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL11A1P12107 NDUFS5P3-201ENST00000450668 321 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.75□□□□□ -1.97
COL11A1P12107 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.75□□□□□ -1.97
COL11A1P12107 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.75□□□□□ -1.97
COL11A1P12107 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL11A1P12107 ELOCP31-201ENST00000540463 467 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 FAM106CP-201ENST00000582212 507 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.75□□□□□ -1.97
COL11A1P12107 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.75□□□□□ -1.97
COL11A1P12107 AC123786.2-201ENST00000603459 275 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 AC090953.1-201ENST00000604305 1092 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 AC007423.1-201ENST00000605009 627 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 AC107294.3-201ENST00000609211 526 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 AL445437.1-201ENST00000623157 3087 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 PHKBP1-201ENST00000450951 1951 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.75□□□□□ -1.97
COL11A1P12107 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL11A1P12107 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL11A1P12107 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
COL11A1P12107 AC066616.2-201ENST00000559334 1481 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
COL11A1P12107 RNU4-7P-201ENST00000364758 141 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 ATP5F1P6-201ENST00000402768 767 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 SNORA3.2-201ENST00000408221 125 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.75□□□□□ -1.97
COL11A1P12107 Z98742.3-201ENST00000418637 326 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 ATG3P1-201ENST00000419507 911 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.75□□□□□ -1.97
COL11A1P12107 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.75□□□□□ -1.97
COL11A1P12107 IFNWP4-201ENST00000453148 294 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 RPS20P22-201ENST00000473700 357 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL11A1P12107 Y_RNA.676-201ENST00000516393 96 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 AC021269.2-201ENST00000532318 330 ntBASIC2.75□□□□□ -1.97
COL11A1P12107 OR7K1P-201ENST00000546439 926 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms