Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC019155.1-201ENST00000382242 574 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TOP2AP11388 SETP10-201ENST00000424368 814 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 MTATP6P11-201ENST00000428071 670 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 AP003467.2-201ENST00000520175 319 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 AC018630.1-201ENST00000541376 925 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 AGGF1P8-201ENST00000562979 1000 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 AC006116.7-201ENST00000590141 756 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 AC010680.4-201ENST00000605334 543 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 MIR6845-201ENST00000613182 61 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 AC009487.2-201ENST00000420969 6821 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 AC097714.1-201ENST00000511272 1647 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 AC090229.1-201ENST00000590983 1609 ntBASIC3.98□□□□□ -1.77
TOP2AP11388 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
TOP2AP11388 SYT14P1-202ENST00000600441 1448 ntBASIC3.97□□□□□ -1.77
TOP2AP11388 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TOP2AP11388 RNU6-984P-201ENST00000363236 109 ntBASIC3.97□□□□□ -1.77
TOP2AP11388 RN7SKP32-201ENST00000410167 303 ntBASIC3.97□□□□□ -1.77
TOP2AP11388 HMGB1P11-201ENST00000413899 637 ntBASIC3.97□□□□□ -1.77
TOP2AP11388 AC108860.1-201ENST00000484521 383 ntBASIC3.97□□□□□ -1.77
TOP2AP11388 AC068305.1-201ENST00000497406 726 ntBASIC3.97□□□□□ -1.77
TOP2AP11388 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.97□□□□□ -1.77
TOP2AP11388 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.97□□□□□ -1.77
TOP2AP11388 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.97□□□□□ -1.77
TOP2AP11388 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.97□□□□□ -1.77
TOP2AP11388 ATP5F1P5-201ENST00000526403 760 ntBASIC3.97□□□□□ -1.77
TOP2AP11388 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.97□□□□□ -1.77
TOP2AP11388 AC103710.2-201ENST00000609912 942 ntBASIC3.97□□□□□ -1.77
TOP2AP11388 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TOP2AP11388 RNU1-91P-201ENST00000364746 163 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 U8.13-201ENST00000390842 128 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 RNU2-2P-201ENST00000410396 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 RANP7-201ENST00000418085 644 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 OR5BN1P-201ENST00000532955 829 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.96□□□□□ -1.78
TOP2AP11388 AC012182.1-201ENST00000570133 895 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.96□□□□□ -1.78
TOP2AP11388 U2.15-201ENST00000611544 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 U2.16-201ENST00000613119 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 U2.12-201ENST00000613778 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 U2.20-201ENST00000613956 192 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 U2.9-201ENST00000615427 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 U2.11-201ENST00000616345 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 U2.2-201ENST00000616535 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 U2.3-201ENST00000617785 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 U2.19-201ENST00000618602 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 RNU2-1-201ENST00000618664 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 U2.6-201ENST00000619225 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 U2.5-201ENST00000619465 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 U2.10-201ENST00000620268 191 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 AL160394.1-201ENST00000624765 724 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TOP2AP11388 AC093908.1-201ENST00000623125 8092 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TOP2AP11388 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TOP2AP11388 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TOP2AP11388 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TOP2AP11388 AC022336.2-201ENST00000568966 2538 ntBASIC3.96□□□□□ -1.78
TOP2AP11388 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TOP2AP11388 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TOP2AP11388 SRIP2-201ENST00000428470 166 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 EXTL2P1-201ENST00000446218 416 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 RPL7P12-201ENST00000446719 750 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.95□□□□□ -1.78
TOP2AP11388 SCARNA16.3-201ENST00000516595 184 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.95□□□□□ -1.78
TOP2AP11388 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.95□□□□□ -1.78
TOP2AP11388 MIR3186-201ENST00000577404 85 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.95□□□□□ -1.78
TOP2AP11388 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
TOP2AP11388 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
TOP2AP11388 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.95□□□□□ -1.78
TOP2AP11388 MIR221-201ENST00000385135 110 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 AL512430.2-201ENST00000406786 339 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 MRPS33P4-201ENST00000434892 317 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.95□□□□□ -1.78
TOP2AP11388 AC092045.1-201ENST00000495716 1231 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.95□□□□□ -1.78
TOP2AP11388 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.95□□□□□ -1.78
TOP2AP11388 AC105137.2-201ENST00000569073 466 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 AC103710.1-201ENST00000610003 901 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 AC009831.4-201ENST00000620744 325 ntBASIC3.95□□□□□ -1.78
TOP2AP11388 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TOP2AP11388 OR10AB1P-202ENST00000641219 1686 ntBASIC3.94□□□□□ -1.78
TOP2AP11388 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
TOP2AP11388 AL512646.1-201ENST00000269395 1077 ntBASIC3.94□□□□□ -1.78
TOP2AP11388 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TOP2AP11388 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.94□□□□□ -1.78
TOP2AP11388 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TOP2AP11388 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.94□□□□□ -1.78
TOP2AP11388 NPM1P49-201ENST00000448027 714 ntBASIC3.94□□□□□ -1.78
TOP2AP11388 AL162388.1-201ENST00000450912 352 ntBASIC3.94□□□□□ -1.78
TOP2AP11388 RPS27AP9-201ENST00000477681 438 ntBASIC3.94□□□□□ -1.78
TOP2AP11388 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.94□□□□□ -1.78
TOP2AP11388 HSPE1P18-201ENST00000517602 280 ntBASIC3.94□□□□□ -1.78
TOP2AP11388 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.94□□□□□ -1.78
TOP2AP11388 HMGB1P41-201ENST00000520234 440 ntBASIC3.94□□□□□ -1.78
TOP2AP11388 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.94□□□□□ -1.78
TOP2AP11388 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms