Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DQB2P05538 BX276092.4-201ENST00000452056 248 ntBASIC2.73□□□□□ -1.97
HLA-DQB2P05538 RN7SL297P-201ENST00000483161 293 ntBASIC2.73□□□□□ -1.97
HLA-DQB2P05538 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQB2P05538 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DQB2P05538 AC093770.1-201ENST00000511559 571 ntBASIC2.73□□□□□ -1.97
HLA-DQB2P05538 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.73□□□□□ -1.97
HLA-DQB2P05538 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DQB2P05538 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DQB2P05538 LARP7P3-201ENST00000579888 337 ntBASIC2.73□□□□□ -1.97
HLA-DQB2P05538 VN1R90P-201ENST00000595717 726 ntBASIC2.73□□□□□ -1.97
HLA-DQB2P05538 AC004832.5-201ENST00000608677 401 ntBASIC2.73□□□□□ -1.97
HLA-DQB2P05538 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DQB2P05538 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQB2P05538 MIR4496-201ENST00000635896 61 ntBASIC2.73□□□□□ -1.97
HLA-DQB2P05538 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DQB2P05538 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQB2P05538 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 TAB3P1-202ENST00000452645 1634 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 OR5J1P-201ENST00000313544 939 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 SNORA80A-201ENST00000363922 136 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 RNU6-819P-201ENST00000364116 107 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 AL360182.1-201ENST00000397433 468 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 MTCO3P4-201ENST00000419236 787 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 DPPA2P1-201ENST00000428060 556 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 RPL23AP31-201ENST00000456160 467 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 RPL23AP11-201ENST00000475260 469 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 RPS27AP1-201ENST00000475545 471 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 AC108860.1-201ENST00000484521 383 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 COX6CP8-201ENST00000522620 226 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 GTF3AP2-201ENST00000557014 266 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 AC138761.3-201ENST00000579993 334 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 MIR3690-201ENST00000580266 75 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 MIMT1-201ENST00000597105 1050 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 ATP1B3P1-201ENST00000605365 821 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 AC007619.2-201ENST00000605743 379 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 AC245100.7-201ENST00000609678 442 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 AC069234.5-201ENST00000611056 416 ntBASIC2.72□□□□□ -1.97
HLA-DQB2P05538 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
HLA-DQB2P05538 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 SNORA7.2-201ENST00000364446 145 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 RNU6-98P-201ENST00000384173 107 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 MTATP6P31-201ENST00000406985 692 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 EI24P1-201ENST00000416584 867 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 YPEL5P1-201ENST00000419731 367 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AC244098.2-201ENST00000422068 99 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 RPL7P46-201ENST00000425129 740 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 HIGD1AP11-201ENST00000438361 280 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 TRIM60P18-201ENST00000441518 828 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AP002345.1-201ENST00000456493 928 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 HMGB1P25-201ENST00000468402 607 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AC104689.1-201ENST00000473356 768 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 NCOR1P1-202ENST00000486162 291 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AC096576.1-201ENST00000489014 359 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AC026801.2-201ENST00000515352 425 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 RN7SKP244-201ENST00000516513 307 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 SNORA31.21-201ENST00000517180 77 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AC074029.1-201ENST00000552531 1044 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AC009268.1-201ENST00000561352 1203 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AC091488.1-201ENST00000604239 660 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 BNIP3P7-201ENST00000605641 516 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AL451074.6-201ENST00000608512 729 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AC011978.2-201ENST00000569835 2054 ntBASIC2.71□□□□□ -1.98
HLA-DQB2P05538 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DQB2P05538 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.7□□□□□ -1.98
HLA-DQB2P05538 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
HLA-DQB2P05538 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms