Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.76□□□□□ -1.97
CD74P04233 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.76□□□□□ -1.97
CD74P04233 MIR7851-201ENST00000610611 160 ntBASIC2.76□□□□□ -1.97
CD74P04233 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.76□□□□□ -1.97
CD74P04233 AC084035.1-201ENST00000634543 607 ntBASIC2.76□□□□□ -1.97
CD74P04233 AL356118.1-201ENST00000635272 1078 ntBASIC2.76□□□□□ -1.97
CD74P04233 AC127502.3-201ENST00000636170 1206 ntBASIC2.76□□□□□ -1.97
CD74P04233 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CD74P04233 MTND5P7-201ENST00000413558 1798 ntBASIC2.76□□□□□ -1.97
CD74P04233 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.76□□□□□ -1.97
CD74P04233 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CD74P04233 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CD74P04233 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.75□□□□□ -1.97
CD74P04233 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.75□□□□□ -1.97
CD74P04233 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.75□□□□□ -1.97
CD74P04233 AC109780.2-201ENST00000413467 845 ntBASIC2.75□□□□□ -1.97
CD74P04233 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.75□□□□□ -1.97
CD74P04233 BMS1P22-201ENST00000414726 313 ntBASIC2.75□□□□□ -1.97
CD74P04233 MTCO3P12-201ENST00000416718 547 ntBASIC2.75□□□□□ -1.97
CD74P04233 PAICSP7-201ENST00000419829 962 ntBASIC2.75□□□□□ -1.97
CD74P04233 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.75□□□□□ -1.97
CD74P04233 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.75□□□□□ -1.97
CD74P04233 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.75□□□□□ -1.97
CD74P04233 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.75□□□□□ -1.97
CD74P04233 AL451062.2-201ENST00000427515 271 ntBASIC2.75□□□□□ -1.97
CD74P04233 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.75□□□□□ -1.97
CD74P04233 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.75□□□□□ -1.97
CD74P04233 RPL21P110-201ENST00000433345 446 ntBASIC2.75□□□□□ -1.97
CD74P04233 AL158053.1-201ENST00000441503 453 ntBASIC2.75□□□□□ -1.97
CD74P04233 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.75□□□□□ -1.97
CD74P04233 NOTCH2P1-201ENST00000443481 624 ntBASIC2.75□□□□□ -1.97
CD74P04233 RPL36AP33-201ENST00000450395 310 ntBASIC2.75□□□□□ -1.97
CD74P04233 HMGB1P15-201ENST00000453854 435 ntBASIC2.75□□□□□ -1.97
CD74P04233 BX248409.1-201ENST00000455497 255 ntBASIC2.75□□□□□ -1.97
CD74P04233 GTF2IP12-201ENST00000456547 356 ntBASIC2.75□□□□□ -1.97
CD74P04233 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.75□□□□□ -1.97
CD74P04233 AC034236.1-201ENST00000469891 373 ntBASIC2.75□□□□□ -1.97
CD74P04233 AC068724.1-201ENST00000487100 792 ntBASIC2.75□□□□□ -1.97
CD74P04233 RPS27P23-201ENST00000487608 251 ntBASIC2.75□□□□□ -1.97
CD74P04233 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.75□□□□□ -1.97
CD74P04233 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CD74P04233 PAICSP4-201ENST00000517543 1253 ntBASIC2.75□□□□□ -1.97
CD74P04233 AC019227.1-201ENST00000526902 510 ntBASIC2.75□□□□□ -1.97
CD74P04233 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.75□□□□□ -1.97
CD74P04233 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.75□□□□□ -1.97
CD74P04233 EIF5A2P1-201ENST00000564027 460 ntBASIC2.75□□□□□ -1.97
CD74P04233 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.75□□□□□ -1.97
CD74P04233 MIR4504-201ENST00000577413 92 ntBASIC2.75□□□□□ -1.97
CD74P04233 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.75□□□□□ -1.97
CD74P04233 AC008739.3-201ENST00000603262 127 ntBASIC2.75□□□□□ -1.97
CD74P04233 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.75□□□□□ -1.97
CD74P04233 DPRXP5-201ENST00000604662 539 ntBASIC2.75□□□□□ -1.97
CD74P04233 AC073387.2-201ENST00000604797 784 ntBASIC2.75□□□□□ -1.97
CD74P04233 AC021851.1-201ENST00000608537 1082 ntBASIC2.75□□□□□ -1.97
CD74P04233 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CD74P04233 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.75□□□□□ -1.97
CD74P04233 AL590396.4-201ENST00000636779 956 ntBASIC2.75□□□□□ -1.97
CD74P04233 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.75□□□□□ -1.97
CD74P04233 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
CD74P04233 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CD74P04233 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CD74P04233 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CD74P04233 ZNF734P-201ENST00000419494 1534 ntBASIC2.74□□□□□ -1.97
CD74P04233 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.74□□□□□ -1.97
CD74P04233 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CD74P04233 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CD74P04233 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CD74P04233 RNU6-354P-201ENST00000383862 107 ntBASIC2.74□□□□□ -1.97
CD74P04233 U6.112-201ENST00000384129 70 ntBASIC2.74□□□□□ -1.97
CD74P04233 RNU6-610P-201ENST00000384264 107 ntBASIC2.74□□□□□ -1.97
CD74P04233 MIR200C-201ENST00000384980 68 ntBASIC2.74□□□□□ -1.97
CD74P04233 MIR449B-201ENST00000384995 97 ntBASIC2.74□□□□□ -1.97
CD74P04233 MIR670-201ENST00000390142 98 ntBASIC2.74□□□□□ -1.97
CD74P04233 DSTNP4-201ENST00000399472 474 ntBASIC2.74□□□□□ -1.97
CD74P04233 RNU6-77P-201ENST00000410554 91 ntBASIC2.74□□□□□ -1.97
CD74P04233 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.74□□□□□ -1.97
CD74P04233 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CD74P04233 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.74□□□□□ -1.97
CD74P04233 CYCSP4-201ENST00000429682 331 ntBASIC2.74□□□□□ -1.97
CD74P04233 UBE2V1P6-201ENST00000430840 422 ntBASIC2.74□□□□□ -1.97
CD74P04233 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.74□□□□□ -1.97
CD74P04233 RPS12P18-201ENST00000442381 270 ntBASIC2.74□□□□□ -1.97
CD74P04233 RAB11AP1-201ENST00000442978 646 ntBASIC2.74□□□□□ -1.97
CD74P04233 AL096829.2-201ENST00000446582 742 ntBASIC2.74□□□□□ -1.97
CD74P04233 AL136126.1-201ENST00000473603 402 ntBASIC2.74□□□□□ -1.97
CD74P04233 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CD74P04233 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.74□□□□□ -1.97
CD74P04233 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CD74P04233 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CD74P04233 NAMPTP2-201ENST00000505629 1115 ntBASIC2.74□□□□□ -1.97
CD74P04233 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.74□□□□□ -1.97
CD74P04233 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.74□□□□□ -1.97
CD74P04233 RN7SKP43-201ENST00000516173 320 ntBASIC2.74□□□□□ -1.97
CD74P04233 SNORA31.26-201ENST00000517250 137 ntBASIC2.74□□□□□ -1.97
CD74P04233 IGJP1-201ENST00000522682 475 ntBASIC2.74□□□□□ -1.97
CD74P04233 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.74□□□□□ -1.97
CD74P04233 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.74□□□□□ -1.97
CD74P04233 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.74□□□□□ -1.97
CD74P04233 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.74□□□□□ -1.97
CD74P04233 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms