Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
MT-ND1P03886 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MT-ND1P03886 AL365440.1-201ENST00000436135 2167 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
MT-ND1P03886 PWAR6-201ENST00000552334 4618 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MT-ND1P03886 OTUD4P1-201ENST00000237841 3067 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MT-ND1P03886 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MT-ND1P03886 OR4A15-201ENST00000314706 1035 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MT-ND1P03886 RNA5SP258-201ENST00000362750 119 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 Y_RNA.192-201ENST00000363977 102 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 RNU6-730P-201ENST00000383954 104 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AL049693.1-201ENST00000402760 611 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AP000567.1-201ENST00000406413 156 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AL136133.1-201ENST00000413694 376 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 LUZP4P1-201ENST00000415420 344 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 MTCO3P12-201ENST00000416718 547 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 BOLA3P4-201ENST00000418151 400 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AC005005.2-201ENST00000420779 380 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AL117339.2-201ENST00000430475 180 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 MTCO2P20-201ENST00000437339 673 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.39□□□□□ -1.87
MT-ND1P03886 SETD6P1-201ENST00000444575 317 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 HSFY6P-201ENST00000445573 403 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.39□□□□□ -1.87
MT-ND1P03886 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.39□□□□□ -1.87
MT-ND1P03886 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.39□□□□□ -1.87
MT-ND1P03886 RPL7P52-201ENST00000449200 742 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.39□□□□□ -1.87
MT-ND1P03886 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MT-ND1P03886 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.39□□□□□ -1.87
MT-ND1P03886 VPS26AP1-201ENST00000483197 979 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AL024509.2-201ENST00000493462 493 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.39□□□□□ -1.87
MT-ND1P03886 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.39□□□□□ -1.87
MT-ND1P03886 RN7SKP31-201ENST00000516354 278 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 SCARNA14-201ENST00000516903 136 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.39□□□□□ -1.87
MT-ND1P03886 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.39□□□□□ -1.87
MT-ND1P03886 AC087808.1-201ENST00000520501 361 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AP006245.1-201ENST00000522549 120 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AP001317.1-201ENST00000531194 960 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AL139174.1-201ENST00000531489 886 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 SYF2P1-201ENST00000550658 413 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.39□□□□□ -1.87
MT-ND1P03886 MTND3P12-201ENST00000559068 328 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AC090695.1-201ENST00000561269 1222 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AC093519.1-201ENST00000566109 298 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.39□□□□□ -1.87
MT-ND1P03886 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.39□□□□□ -1.87
MT-ND1P03886 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.39□□□□□ -1.87
MT-ND1P03886 AC022146.1-201ENST00000595307 847 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 VN1R78P-201ENST00000597393 564 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MT-ND1P03886 AC011468.4-201ENST00000603942 409 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AC069545.1-201ENST00000605671 358 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AC080013.3-201ENST00000606839 578 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.39□□□□□ -1.87
MT-ND1P03886 AL512506.2-201ENST00000624472 458 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.39□□□□□ -1.87
MT-ND1P03886 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
MT-ND1P03886 AL672296.1-201ENST00000427780 2158 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 AC109315.1-201ENST00000584143 1347 ntBASIC3.39□□□□□ -1.87
MT-ND1P03886 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MT-ND1P03886 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.38□□□□□ -1.87
MT-ND1P03886 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.38□□□□□ -1.87
MT-ND1P03886 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.38□□□□□ -1.87
MT-ND1P03886 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 MIR372-201ENST00000362225 67 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 RNU6-821P-201ENST00000390995 107 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 RNU6-1300P-201ENST00000391046 108 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 RNU6-55P-201ENST00000411092 107 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 RNU6-954P-201ENST00000411355 107 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 RAD23BP2-201ENST00000416003 1207 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 MTCO2P21-201ENST00000419780 677 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.38□□□□□ -1.87
MT-ND1P03886 FNDC3CP-201ENST00000420795 1155 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 AL035410.1-201ENST00000427409 427 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 RPL31P54-201ENST00000429803 370 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.38□□□□□ -1.87
MT-ND1P03886 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.38□□□□□ -1.87
MT-ND1P03886 USP9YP22-201ENST00000438971 294 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.38□□□□□ -1.87
MT-ND1P03886 RPL21P89-201ENST00000444021 467 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.38□□□□□ -1.87
MT-ND1P03886 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.38□□□□□ -1.87
MT-ND1P03886 RFC5P1-201ENST00000454419 874 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms