Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-2O95096 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-2O95096 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-2O95096 RNU6-714P-201ENST00000516963 103 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 IGKV2-38-201ENST00000517443 247 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 MYL12AP1-201ENST00000518490 515 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-2O95096 MTCO1P49-201ENST00000523429 802 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-2O95096 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.8□□□□□ -1.8
NKX2-2O95096 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-2O95096 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-2O95096 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-2O95096 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-2O95096 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-2O95096 MIR5684-201ENST00000585074 65 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AC010928.3-201ENST00000587712 541 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-2O95096 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-2O95096 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-2O95096 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-2O95096 BNIP3P23-201ENST00000599655 511 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 SNRPGP15-201ENST00000600149 222 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 BCRP9-201ENST00000605312 388 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AC092354.1-201ENST00000606057 376 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AC015813.4-201ENST00000610469 179 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AC091965.5-201ENST00000624785 342 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-2O95096 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NKX2-2O95096 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-2O95096 CR381670.1-201ENST00000624291 1693 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-2O95096 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-2O95096 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-2O95096 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-2O95096 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-2O95096 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-2O95096 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-2O95096 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-2O95096 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-2O95096 AC006378.2-201ENST00000623178 2476 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX2-2O95096 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX2-2O95096 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-2O95096 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.79□□□□□ -1.8
NKX2-2O95096 SNORA60-201ENST00000362396 134 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 RNU6-501P-201ENST00000364072 100 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-2O95096 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NKX2-2O95096 AL021407.1-201ENST00000404531 386 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 MTCO1P17-201ENST00000411522 491 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX2-2O95096 AC004690.1-201ENST00000418216 328 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AC016712.1-201ENST00000431088 378 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-2O95096 MTND4LP10-201ENST00000435146 291 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX2-2O95096 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX2-2O95096 AL512286.1-201ENST00000439244 400 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NKX2-2O95096 CDC27P1-201ENST00000445384 715 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 NUTF2P3-201ENST00000448540 384 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-2O95096 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-2O95096 Z82190.1-201ENST00000454534 490 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 RPL38P1-201ENST00000460914 211 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-2O95096 RN7SL271P-201ENST00000487601 295 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 RPS4XP15-201ENST00000489210 795 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AC078918.1-201ENST00000498515 228 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AC083829.1-201ENST00000503756 657 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.79□□□□□ -1.8
NKX2-2O95096 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-2O95096 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-2O95096 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-2O95096 AP004371.1-201ENST00000525240 214 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-2O95096 AC013828.2-201ENST00000532487 235 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 CYCSP29-201ENST00000533731 318 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AC023161.2-201ENST00000551218 780 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-2O95096 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-2O95096 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-2O95096 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-2O95096 AC023575.1-201ENST00000580510 358 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 RN7SL600P-201ENST00000581811 299 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 MIR544B-201ENST00000582372 78 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AC008507.1-201ENST00000587506 734 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX2-2O95096 AC010620.1-201ENST00000601088 1102 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AF131215.7-201ENST00000602443 707 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AP000403.1-201ENST00000603349 851 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 Z94722.1-201ENST00000604328 474 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AC012603.1-201ENST00000606424 528 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 LINC00901.1-201ENST00000617252 152 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AC009237.17-201ENST00000618111 748 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 AL356585.4-201ENST00000623078 1229 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 OR52H1-202ENST00000641796 1061 ntBASIC3.79□□□□□ -1.8
NKX2-2O95096 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms