Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS4BO75351 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS4BO75351 MTND4LP11-201ENST00000422184 280 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 CHIAP3-201ENST00000423668 1133 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 RPL21P91-201ENST00000429231 479 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 RPL23AP25-201ENST00000430973 463 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS4BO75351 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS4BO75351 MTATP6P23-201ENST00000440153 476 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 RABEPKP1-201ENST00000440529 1026 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 HSPE1P28-201ENST00000443139 211 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS4BO75351 GEMIN8P3-201ENST00000445417 720 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 H2AFZP5-201ENST00000446960 382 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS4BO75351 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS4BO75351 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS4BO75351 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS4BO75351 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS4BO75351 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS4BO75351 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS4BO75351 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS4BO75351 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS4BO75351 AC026402.1-201ENST00000513642 170 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 SNORA18.6-201ENST00000516792 115 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS4BO75351 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS4BO75351 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS4BO75351 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS4BO75351 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS4BO75351 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS4BO75351 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS4BO75351 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS4BO75351 VN1R79P-201ENST00000593540 513 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS4BO75351 AF250324.2-201ENST00000608299 610 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 FAM27B-201ENST00000610601 213 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 AC009318.4-201ENST00000620496 486 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 AC004009.2-201ENST00000623016 728 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 AC000123.2-201ENST00000623124 461 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 OR5H6-203ENST00000642105 978 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 AL592182.3-201ENST00000642132 3304 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS4BO75351 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
VPS4BO75351 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS4BO75351 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS4BO75351 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
VPS4BO75351 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
VPS4BO75351 AC139713.2-214ENST00000642059 1811 ntBASIC4.51□□□□□ -1.69
VPS4BO75351 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS4BO75351 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS4BO75351 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS4BO75351 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
VPS4BO75351 FARSBP1-201ENST00000435808 1778 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 MAPK10-304ENST00000641341 3984 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS4BO75351 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS4BO75351 AL049780.3-201ENST00000624612 1583 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
VPS4BO75351 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VPS4BO75351 Y_RNA.248-201ENST00000364501 109 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VPS4BO75351 RN7SKP263-201ENST00000411194 309 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AL591848.1-201ENST00000413092 322 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 C1DP2-201ENST00000418167 426 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.5□□□□□ -1.69
VPS4BO75351 GLRXP1-201ENST00000423261 334 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS4BO75351 OR4F13P-201ENST00000428478 931 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS4BO75351 AC073614.1-201ENST00000438690 650 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS4BO75351 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS4BO75351 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS4BO75351 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS4BO75351 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
VPS4BO75351 PGBD4P4-201ENST00000509673 613 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS4BO75351 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
VPS4BO75351 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.5□□□□□ -1.69
VPS4BO75351 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.5□□□□□ -1.69
VPS4BO75351 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS4BO75351 AC124947.2-202ENST00000552735 133 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS4BO75351 AC006960.3-201ENST00000561845 705 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS4BO75351 AL359999.1-201ENST00000604513 294 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AL390208.1-201ENST00000605885 644 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AP002360.4-201ENST00000606980 481 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AC091965.4-201ENST00000607691 587 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AL513477.2-201ENST00000607858 568 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS4BO75351 AC091304.9-201ENST00000612091 226 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS4BO75351 AC072046.2-201ENST00000618366 268 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 MIR6853-201ENST00000619642 74 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 AC073534.2-201ENST00000620377 381 ntBASIC4.5□□□□□ -1.69
VPS4BO75351 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS4BO75351 AC138649.3-201ENST00000622154 254 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms