Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC022861.1-201ENST00000522981 663 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 AC018442.3-201ENST00000523025 183 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 SUB1P1-201ENST00000524415 382 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM13O60858 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM13O60858 AC126177.5-201ENST00000549599 178 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM13O60858 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRIM13O60858 CYCSP40-201ENST00000575927 294 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 MIR4680-201ENST00000580906 66 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM13O60858 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM13O60858 AL022345.1-201ENST00000607292 135 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 AC009318.4-201ENST00000620496 486 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM13O60858 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM13O60858 AC244517.12-201ENST00000623581 663 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 AC079597.1-201ENST00000624306 508 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM13O60858 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
TRIM13O60858 NUP58P1-201ENST00000502546 1738 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM13O60858 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM13O60858 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM13O60858 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
TRIM13O60858 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM13O60858 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM13O60858 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM13O60858 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.96□□□□□ -1.62
TRIM13O60858 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM13O60858 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 LINC01355-201ENST00000566551 5444 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TRIM13O60858 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
TRIM13O60858 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM13O60858 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TRIM13O60858 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TRIM13O60858 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM13O60858 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM13O60858 Y_RNA.47-201ENST00000362697 108 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 RNU6-831P-201ENST00000384548 107 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 MIR506-201ENST00000384998 124 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 RNU6-985P-201ENST00000410182 104 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 AL136133.1-201ENST00000413694 376 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM13O60858 HSPE1P1-201ENST00000421494 318 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 MTCYBP10-201ENST00000424905 650 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 RPS3AP52-201ENST00000435639 297 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM13O60858 YWHAEP1-201ENST00000453697 763 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 NF1P3-201ENST00000457709 450 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 Y_RNA.635-201ENST00000459041 101 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 AC094085.1-201ENST00000468914 584 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 AC010301.1-201ENST00000473936 355 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 RPL21P6-201ENST00000479171 504 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 AC090686.1-201ENST00000481577 749 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 AC233702.1-201ENST00000482905 502 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 AC024558.1-201ENST00000505008 528 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM13O60858 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM13O60858 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM13O60858 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM13O60858 AC005363.1-201ENST00000530779 351 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM13O60858 MYL12BP1-201ENST00000569826 507 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM13O60858 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.95□□□□□ -1.62
TRIM13O60858 AC069307.1-201ENST00000602820 447 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 AC005014.2-201ENST00000607795 599 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 RN7SL787P-201ENST00000613000 284 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 Z69720.2-201ENST00000624755 279 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM13O60858 AC026634.1-201ENST00000634369 198 ntBASIC4.95□□□□□ -1.62
TRIM13O60858 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM13O60858 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM13O60858 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM13O60858 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TRIM13O60858 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM13O60858 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM13O60858 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM13O60858 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM13O60858 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM13O60858 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM13O60858 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
TRIM13O60858 OR1S2-201ENST00000302592 978 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM13O60858 Y_RNA.148-201ENST00000363557 117 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 RNU6-115P-201ENST00000364310 107 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 RNA5SP510-201ENST00000364697 99 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 SNORA67-201ENST00000384423 137 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 MIR320C1-201ENST00000408566 88 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 RN7SKP106-201ENST00000410832 272 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AC073264.1-201ENST00000411508 416 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.94□□□□□ -1.62
TRIM13O60858 DUTP6-201ENST00000425573 462 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 RBMY2QP-201ENST00000429799 1147 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 RPS15AP9-201ENST00000439856 381 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AL591623.2-201ENST00000449978 222 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AC022431.1-201ENST00000450941 438 ntBASIC4.94□□□□□ -1.62
TRIM13O60858 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms