Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RNA5SP375-201ENST00000362975 119 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 U3.13-201ENST00000364804 214 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 RNU6-1289P-201ENST00000384431 106 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 RNU6-790P-201ENST00000384479 105 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 MIR765-201ENST00000390226 114 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
GFRA3O60609 RNU6-278P-201ENST00000390945 109 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 RNU6-700P-201ENST00000391043 107 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 AL030996.1-201ENST00000411430 235 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 HMGA1P8-201ENST00000414130 321 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 RPS12P23-201ENST00000419579 400 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 AC063976.4-201ENST00000421971 163 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.05□□□□□ -1.44
GFRA3O60609 AC016696.1-201ENST00000446949 318 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 AC007395.1-201ENST00000451333 677 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC6.05□□□□□ -1.44
GFRA3O60609 FCF1P8-201ENST00000510322 597 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 RNU7-121P-201ENST00000516604 62 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 Y_RNA.710-201ENST00000516975 110 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 AC025755.1-201ENST00000521306 278 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.05□□□□□ -1.44
GFRA3O60609 AC104576.1-201ENST00000524225 88 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 AC008083.2-201ENST00000546707 476 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.05□□□□□ -1.44
GFRA3O60609 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.05□□□□□ -1.44
GFRA3O60609 AC023824.2-201ENST00000566185 400 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 AC090751.1-201ENST00000566966 267 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA3O60609 AC240442.1-201ENST00000616055 283 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 AC130448.2-201ENST00000624082 374 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA3O60609 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA3O60609 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.05□□□□□ -1.44
GFRA3O60609 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA3O60609 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
GFRA3O60609 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA3O60609 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA3O60609 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA3O60609 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA3O60609 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.05□□□□□ -1.44
GFRA3O60609 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.05□□□□□ -1.44
GFRA3O60609 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA3O60609 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA3O60609 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA3O60609 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA3O60609 AC022325.1-201ENST00000502748 2199 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA3O60609 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
GFRA3O60609 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
GFRA3O60609 AC112255.1-201ENST00000624070 2493 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.04□□□□□ -1.44
GFRA3O60609 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA3O60609 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA3O60609 AC087516.1-201ENST00000561236 2428 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA3O60609 Y_RNA.525-201ENST00000384570 113 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 RPL21P75-201ENST00000396599 483 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 AC009804.1-201ENST00000400949 179 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 RPL21P28-201ENST00000401418 483 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA3O60609 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.04□□□□□ -1.44
GFRA3O60609 AL590556.1-201ENST00000423231 483 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA3O60609 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.04□□□□□ -1.44
GFRA3O60609 AC073063.1-201ENST00000434352 607 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC6.04□□□□□ -1.44
GFRA3O60609 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA3O60609 RN7SL72P-201ENST00000460697 269 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 RPL21P11-201ENST00000461458 483 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 RPL21P39-201ENST00000463605 483 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 AC022795.1-201ENST00000473808 480 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 RPS14P8-201ENST00000478778 369 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 RPS4XP23-201ENST00000487801 237 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 UBA52P3-201ENST00000491303 382 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 AC093591.1-201ENST00000491435 481 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 RPL21P16-201ENST00000495531 483 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 Y_RNA.685-201ENST00000516532 108 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 RNU6-762P-201ENST00000517107 102 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA3O60609 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA3O60609 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA3O60609 NDUFA5P6-201ENST00000542110 379 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA3O60609 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA3O60609 IGBP1P1-201ENST00000554337 1009 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA3O60609 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC6.04□□□□□ -1.44
GFRA3O60609 AC023043.4-201ENST00000612081 449 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA3O60609 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA3O60609 CTAGE11P-201ENST00000451540 2353 ntBASIC6.04□□□□□ -1.44
GFRA3O60609 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.04□□□□□ -1.44
GFRA3O60609 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.04□□□□□ -1.44
GFRA3O60609 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.04□□□□□ -1.44
GFRA3O60609 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.04□□□□□ -1.44
GFRA3O60609 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA3O60609 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA3O60609 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA3O60609 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GFRA3O60609 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms