Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SSX4O60224 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSX4O60224 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX4O60224 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX4O60224 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SSX4O60224 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SSX4O60224 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX4O60224 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.7□□□□□ -1.82
SSX4O60224 RNU1-13P-201ENST00000384499 162 ntBASIC3.7□□□□□ -1.82
SSX4O60224 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.7□□□□□ -1.82
SSX4O60224 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX4O60224 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX4O60224 RNU4-72P-201ENST00000410754 173 ntBASIC3.7□□□□□ -1.82
SSX4O60224 RHEBP3-201ENST00000411920 351 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSX4O60224 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSX4O60224 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX4O60224 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC092832.1-201ENST00000422934 400 ntBASIC3.7□□□□□ -1.82
SSX4O60224 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX4O60224 AL590233.1-201ENST00000430017 456 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX4O60224 MRPS18BP2-201ENST00000434310 759 ntBASIC3.7□□□□□ -1.82
SSX4O60224 USP9YP7-201ENST00000436723 430 ntBASIC3.7□□□□□ -1.82
SSX4O60224 HSFY6P-201ENST00000445573 403 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AL359073.1-201ENST00000448036 403 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX4O60224 USP9YP32-201ENST00000452432 430 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AL445669.2-201ENST00000454425 421 ntBASIC3.7□□□□□ -1.82
SSX4O60224 SUMO2P2-201ENST00000456482 255 ntBASIC3.7□□□□□ -1.82
SSX4O60224 BTF3P5-201ENST00000457252 467 ntBASIC3.7□□□□□ -1.82
SSX4O60224 ARPC3P2-201ENST00000457786 533 ntBASIC3.7□□□□□ -1.82
SSX4O60224 FAM172BP-201ENST00000487497 1089 ntBASIC3.7□□□□□ -1.82
SSX4O60224 RN7SL812P-201ENST00000493791 279 ntBASIC3.7□□□□□ -1.82
SSX4O60224 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSX4O60224 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
SSX4O60224 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX4O60224 LTV1P1-201ENST00000510683 1237 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC119751.5-201ENST00000514077 770 ntBASIC3.7□□□□□ -1.82
SSX4O60224 MTND4LP31-201ENST00000514859 294 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC093853.1-201ENST00000515689 483 ntBASIC3.7□□□□□ -1.82
SSX4O60224 Vault.1-201ENST00000516474 102 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.7□□□□□ -1.82
SSX4O60224 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX4O60224 OR4P1P-201ENST00000530808 1136 ntBASIC3.7□□□□□ -1.82
SSX4O60224 TRAV8-5-201ENST00000537369 341 ntBASIC3.7□□□□□ -1.82
SSX4O60224 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX4O60224 OR8R1P-201ENST00000543943 764 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX4O60224 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.7□□□□□ -1.82
SSX4O60224 AC009101.1-201ENST00000568135 242 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.7□□□□□ -1.82
SSX4O60224 AP000811.1-201ENST00000603803 651 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC079587.1-201ENST00000603846 277 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AL049634.3-201ENST00000604968 457 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC110741.2-201ENST00000605278 268 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC018816.2-201ENST00000621460 353 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC022079.1-201ENST00000621546 602 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC112484.5-201ENST00000624189 228 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC091925.2-201ENST00000625059 256 ntBASIC3.7□□□□□ -1.82
SSX4O60224 RNA5SP196-201ENST00000625967 102 ntBASIC3.7□□□□□ -1.82
SSX4O60224 MIR492-201ENST00000638676 116 ntBASIC3.7□□□□□ -1.82
SSX4O60224 LARP1BP1-201ENST00000506036 1359 ntBASIC3.7□□□□□ -1.82
SSX4O60224 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSX4O60224 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.7□□□□□ -1.82
SSX4O60224 NCAPGP1-201ENST00000505112 1814 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC087359.1-201ENST00000508335 1740 ntBASIC3.7□□□□□ -1.82
SSX4O60224 AC097714.1-201ENST00000511272 1647 ntBASIC3.7□□□□□ -1.82
SSX4O60224 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSX4O60224 AC090337.1-201ENST00000579651 2074 ntBASIC3.69□□□□□ -1.82
SSX4O60224 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSX4O60224 RPL21P132-201ENST00000331267 462 ntBASIC3.69□□□□□ -1.82
SSX4O60224 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SSX4O60224 AL445189.1-201ENST00000405722 338 ntBASIC3.69□□□□□ -1.82
SSX4O60224 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SSX4O60224 MTATP6P27-201ENST00000416987 621 ntBASIC3.69□□□□□ -1.82
SSX4O60224 AC127526.1-201ENST00000417526 366 ntBASIC3.69□□□□□ -1.82
SSX4O60224 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.69□□□□□ -1.82
SSX4O60224 AC019178.2-201ENST00000423595 505 ntBASIC3.69□□□□□ -1.82
SSX4O60224 MTND4P20-201ENST00000424125 869 ntBASIC3.69□□□□□ -1.82
SSX4O60224 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.69□□□□□ -1.82
SSX4O60224 AC007742.1-201ENST00000425789 329 ntBASIC3.69□□□□□ -1.82
SSX4O60224 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX4O60224 MTND1P20-201ENST00000430341 950 ntBASIC3.69□□□□□ -1.82
SSX4O60224 AC087650.1-201ENST00000431445 468 ntBASIC3.69□□□□□ -1.82
SSX4O60224 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX4O60224 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.69□□□□□ -1.82
SSX4O60224 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.69□□□□□ -1.82
SSX4O60224 ELOCP26-201ENST00000436067 329 ntBASIC3.69□□□□□ -1.82
SSX4O60224 MTND5P14-201ENST00000441481 1267 ntBASIC3.69□□□□□ -1.82
SSX4O60224 SETD6P1-201ENST00000444575 317 ntBASIC3.69□□□□□ -1.82
SSX4O60224 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.69□□□□□ -1.82
SSX4O60224 OR6K5P-201ENST00000447050 945 ntBASIC3.69□□□□□ -1.82
SSX4O60224 HMGN2P21-201ENST00000447764 270 ntBASIC3.69□□□□□ -1.82
SSX4O60224 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.69□□□□□ -1.82
SSX4O60224 OR6C5P-201ENST00000452388 923 ntBASIC3.69□□□□□ -1.82
SSX4O60224 BX322784.1-201ENST00000455793 1077 ntBASIC3.69□□□□□ -1.82
SSX4O60224 RPL31P50-201ENST00000471002 296 ntBASIC3.69□□□□□ -1.82
SSX4O60224 RPL35P6-201ENST00000490024 372 ntBASIC3.69□□□□□ -1.82
SSX4O60224 AC068305.1-201ENST00000497406 726 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms