Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNU4-55P-201ENST00000410731 137 ntBASIC4.46□□□□□ -1.7
PROM1O43490 AL591848.1-201ENST00000413092 322 ntBASIC4.46□□□□□ -1.7
PROM1O43490 AC009237.5-201ENST00000414271 501 ntBASIC4.46□□□□□ -1.7
PROM1O43490 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 AC004690.1-201ENST00000418216 328 ntBASIC4.46□□□□□ -1.7
PROM1O43490 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.46□□□□□ -1.7
PROM1O43490 RAD23BP1-201ENST00000421404 1227 ntBASIC4.46□□□□□ -1.7
PROM1O43490 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PROM1O43490 ISCA1P6-201ENST00000427740 390 ntBASIC4.46□□□□□ -1.7
PROM1O43490 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.46□□□□□ -1.7
PROM1O43490 FCF1P1-201ENST00000432690 571 ntBASIC4.46□□□□□ -1.7
PROM1O43490 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 SNRPEP8-201ENST00000442866 260 ntBASIC4.46□□□□□ -1.7
PROM1O43490 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.46□□□□□ -1.7
PROM1O43490 AC104651.2-201ENST00000447549 528 ntBASIC4.46□□□□□ -1.7
PROM1O43490 MTND5P20-201ENST00000448677 143 ntBASIC4.46□□□□□ -1.7
PROM1O43490 AC073264.2-201ENST00000448886 166 ntBASIC4.46□□□□□ -1.7
PROM1O43490 NDUFS5P3-201ENST00000450668 321 ntBASIC4.46□□□□□ -1.7
PROM1O43490 MTND3P10-201ENST00000450967 341 ntBASIC4.46□□□□□ -1.7
PROM1O43490 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.46□□□□□ -1.7
PROM1O43490 AC079168.2-201ENST00000453977 416 ntBASIC4.46□□□□□ -1.7
PROM1O43490 MTCO3P2-201ENST00000457365 171 ntBASIC4.46□□□□□ -1.7
PROM1O43490 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.46□□□□□ -1.7
PROM1O43490 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.46□□□□□ -1.7
PROM1O43490 RPL23AP72-201ENST00000492447 435 ntBASIC4.46□□□□□ -1.7
PROM1O43490 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.46□□□□□ -1.7
PROM1O43490 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 AC034159.1-201ENST00000513885 583 ntBASIC4.46□□□□□ -1.7
PROM1O43490 Y_RNA.702-201ENST00000516843 96 ntBASIC4.46□□□□□ -1.7
PROM1O43490 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.46□□□□□ -1.7
PROM1O43490 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.46□□□□□ -1.7
PROM1O43490 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.46□□□□□ -1.7
PROM1O43490 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.46□□□□□ -1.7
PROM1O43490 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.46□□□□□ -1.7
PROM1O43490 MIR3682-201ENST00000581338 84 ntBASIC4.46□□□□□ -1.7
PROM1O43490 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.46□□□□□ -1.7
PROM1O43490 DUXAP4-201ENST00000603046 613 ntBASIC4.46□□□□□ -1.7
PROM1O43490 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.46□□□□□ -1.7
PROM1O43490 MIR6780A-201ENST00000615089 68 ntBASIC4.46□□□□□ -1.7
PROM1O43490 MIR6864-201ENST00000617935 70 ntBASIC4.46□□□□□ -1.7
PROM1O43490 MIR6758-201ENST00000620653 63 ntBASIC4.46□□□□□ -1.7
PROM1O43490 AL023881.1-201ENST00000621088 301 ntBASIC4.46□□□□□ -1.7
PROM1O43490 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.46□□□□□ -1.7
PROM1O43490 U6.101-201ENST00000637707 76 ntBASIC4.46□□□□□ -1.7
PROM1O43490 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.46□□□□□ -1.7
PROM1O43490 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
PROM1O43490 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 AL133412.1-201ENST00000380194 2992 ntBASIC4.46□□□□□ -1.7
PROM1O43490 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 AL022578.1-201ENST00000439330 1433 ntBASIC4.46□□□□□ -1.7
PROM1O43490 AC108751.5-201ENST00000492880 1336 ntBASIC4.46□□□□□ -1.7
PROM1O43490 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
PROM1O43490 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PROM1O43490 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PROM1O43490 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.45□□□□□ -1.7
PROM1O43490 AL672167.1-205ENST00000641112 3080 ntBASIC4.45□□□□□ -1.7
PROM1O43490 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PROM1O43490 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PROM1O43490 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PROM1O43490 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
PROM1O43490 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PROM1O43490 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PROM1O43490 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PROM1O43490 RNU1-83P-201ENST00000363426 164 ntBASIC4.45□□□□□ -1.7
PROM1O43490 RNU6-769P-201ENST00000384407 104 ntBASIC4.45□□□□□ -1.7
PROM1O43490 RNA5SP372-201ENST00000390836 115 ntBASIC4.45□□□□□ -1.7
PROM1O43490 CALM2P3-201ENST00000400429 449 ntBASIC4.45□□□□□ -1.7
PROM1O43490 DHFRP6-201ENST00000401776 268 ntBASIC4.45□□□□□ -1.7
PROM1O43490 HMGB1P17-201ENST00000403495 628 ntBASIC4.45□□□□□ -1.7
PROM1O43490 AL080315.1-201ENST00000406055 466 ntBASIC4.45□□□□□ -1.7
PROM1O43490 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PROM1O43490 BX510359.2-201ENST00000417920 305 ntBASIC4.45□□□□□ -1.7
PROM1O43490 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.45□□□□□ -1.7
PROM1O43490 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PROM1O43490 FABP7P1-201ENST00000424004 391 ntBASIC4.45□□□□□ -1.7
PROM1O43490 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.45□□□□□ -1.7
PROM1O43490 USP9YP36-201ENST00000424581 829 ntBASIC4.45□□□□□ -1.7
PROM1O43490 MTND3P23-201ENST00000431980 347 ntBASIC4.45□□□□□ -1.7
PROM1O43490 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.45□□□□□ -1.7
PROM1O43490 AC005154.2-201ENST00000438110 379 ntBASIC4.45□□□□□ -1.7
PROM1O43490 MTND5P14-201ENST00000441481 1267 ntBASIC4.45□□□□□ -1.7
PROM1O43490 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.45□□□□□ -1.7
PROM1O43490 TDGF1P1-201ENST00000445734 527 ntBASIC4.45□□□□□ -1.7
PROM1O43490 ARPC3P5-201ENST00000448802 534 ntBASIC4.45□□□□□ -1.7
PROM1O43490 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.45□□□□□ -1.7
PROM1O43490 AL513533.1-201ENST00000453728 415 ntBASIC4.45□□□□□ -1.7
PROM1O43490 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.45□□□□□ -1.7
PROM1O43490 AC026410.2-201ENST00000460281 156 ntBASIC4.45□□□□□ -1.7
PROM1O43490 RPL7P22-201ENST00000466005 733 ntBASIC4.45□□□□□ -1.7
PROM1O43490 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PROM1O43490 AC025164.1-201ENST00000496249 478 ntBASIC4.45□□□□□ -1.7
PROM1O43490 AC083829.1-201ENST00000503756 657 ntBASIC4.45□□□□□ -1.7
PROM1O43490 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.45□□□□□ -1.7
PROM1O43490 AC009646.1-201ENST00000510455 318 ntBASIC4.45□□□□□ -1.7
PROM1O43490 AC024589.1-201ENST00000512207 263 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms