Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 AP006245.2-201ENST00000522004 300 ntBASIC8.13□□□□□ -1.11
VGFO15240 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC8.13□□□□□ -1.11
VGFO15240 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VGFO15240 AL138889.2-201ENST00000603883 242 ntBASIC8.13□□□□□ -1.11
VGFO15240 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC8.13□□□□□ -1.11
VGFO15240 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.13□□□□□ -1.11
VGFO15240 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VGFO15240 AL445437.1-201ENST00000623157 3087 ntBASIC8.13□□□□□ -1.11
VGFO15240 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
VGFO15240 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
VGFO15240 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VGFO15240 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
VGFO15240 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
VGFO15240 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
VGFO15240 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VGFO15240 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC8.12□□□□□ -1.11
VGFO15240 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
VGFO15240 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC8.12□□□□□ -1.11
VGFO15240 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VGFO15240 AC009313.2-201ENST00000417893 1941 ntBASIC8.12□□□□□ -1.11
VGFO15240 RNU6-1059P-201ENST00000363752 98 ntBASIC8.12□□□□□ -1.11
VGFO15240 Y_RNA.399-201ENST00000383955 105 ntBASIC8.12□□□□□ -1.11
VGFO15240 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
VGFO15240 SNORA16.2-201ENST00000390991 127 ntBASIC8.12□□□□□ -1.11
VGFO15240 AL445189.1-201ENST00000405722 338 ntBASIC8.12□□□□□ -1.11
VGFO15240 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC8.12□□□□□ -1.11
VGFO15240 AC234779.1-201ENST00000425910 285 ntBASIC8.12□□□□□ -1.11
VGFO15240 AC097713.2-201ENST00000430199 356 ntBASIC8.12□□□□□ -1.11
VGFO15240 AL353597.2-202ENST00000434901 373 ntBASIC8.12□□□□□ -1.11
VGFO15240 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.12□□□□□ -1.11
VGFO15240 RN7SL329P-201ENST00000467740 299 ntBASIC8.12□□□□□ -1.11
VGFO15240 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
VGFO15240 AC105758.1-201ENST00000506038 399 ntBASIC8.12□□□□□ -1.11
VGFO15240 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC8.12□□□□□ -1.11
VGFO15240 AC105384.2-201ENST00000508433 640 ntBASIC8.12□□□□□ -1.11
VGFO15240 AC097486.1-201ENST00000515331 210 ntBASIC8.12□□□□□ -1.11
VGFO15240 AC104057.1-201ENST00000515547 497 ntBASIC8.12□□□□□ -1.11
VGFO15240 RN7SKP92-201ENST00000517266 244 ntBASIC8.12□□□□□ -1.11
VGFO15240 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC8.12□□□□□ -1.11
VGFO15240 AL121576.1-201ENST00000556055 276 ntBASIC8.12□□□□□ -1.11
VGFO15240 SUB1P3-201ENST00000564581 315 ntBASIC8.12□□□□□ -1.11
VGFO15240 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC8.12□□□□□ -1.11
VGFO15240 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC8.12□□□□□ -1.11
VGFO15240 AC008162.1-201ENST00000604718 254 ntBASIC8.12□□□□□ -1.11
VGFO15240 AL670379.4-201ENST00000605279 254 ntBASIC8.12□□□□□ -1.11
VGFO15240 SDR42E1P2-201ENST00000614861 481 ntBASIC8.12□□□□□ -1.11
VGFO15240 SDR42E1P4-201ENST00000620894 481 ntBASIC8.12□□□□□ -1.11
VGFO15240 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC8.12□□□□□ -1.11
VGFO15240 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC8.12□□□□□ -1.11
VGFO15240 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC8.12□□□□□ -1.11
VGFO15240 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
VGFO15240 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
VGFO15240 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
VGFO15240 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
VGFO15240 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VGFO15240 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
VGFO15240 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VGFO15240 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VGFO15240 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VGFO15240 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
VGFO15240 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VGFO15240 AC073365.1-203ENST00000641055 1992 ntBASIC8.11□□□□□ -1.11
VGFO15240 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VGFO15240 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
VGFO15240 GABPAP-201ENST00000419271 1356 ntBASIC8.11□□□□□ -1.11
VGFO15240 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
VGFO15240 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.11□□□□□ -1.11
VGFO15240 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.11□□□□□ -1.11
VGFO15240 TTC41P-205ENST00000551270 3963 ntBASIC8.11□□□□□ -1.11
VGFO15240 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC8.11□□□□□ -1.11
VGFO15240 AP004607.3-201ENST00000530354 3915 ntBASIC8.11□□□□□ -1.11
VGFO15240 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VGFO15240 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
VGFO15240 SNORD82-201ENST00000365530 70 ntBASIC8.11□□□□□ -1.11
VGFO15240 RNU6-746P-201ENST00000384112 109 ntBASIC8.11□□□□□ -1.11
VGFO15240 RN7SKP126-201ENST00000411143 300 ntBASIC8.11□□□□□ -1.11
VGFO15240 GSTM3P2-201ENST00000412746 530 ntBASIC8.11□□□□□ -1.11
VGFO15240 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VGFO15240 ELOCP20-201ENST00000422460 345 ntBASIC8.11□□□□□ -1.11
VGFO15240 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC8.11□□□□□ -1.11
VGFO15240 RPS27P18-201ENST00000431701 247 ntBASIC8.11□□□□□ -1.11
VGFO15240 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC8.11□□□□□ -1.11
VGFO15240 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC8.11□□□□□ -1.11
VGFO15240 AL133244.1-201ENST00000456007 258 ntBASIC8.11□□□□□ -1.11
VGFO15240 RPL7P5-201ENST00000471472 736 ntBASIC8.11□□□□□ -1.11
VGFO15240 AC117503.1-201ENST00000472241 394 ntBASIC8.11□□□□□ -1.11
VGFO15240 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VGFO15240 SNORA40.14-201ENST00000516543 86 ntBASIC8.11□□□□□ -1.11
VGFO15240 RNU6-685P-201ENST00000517088 95 ntBASIC8.11□□□□□ -1.11
VGFO15240 IL7-206ENST00000520269 456 ntTSL 3 BASIC8.11□□□□□ -1.11
VGFO15240 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC8.11□□□□□ -1.11
VGFO15240 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC8.11□□□□□ -1.11
VGFO15240 AC008521.1-201ENST00000587471 187 ntBASIC8.11□□□□□ -1.11
VGFO15240 HMGB1P50-201ENST00000605814 607 ntBASIC8.11□□□□□ -1.11
VGFO15240 FTX_2.1-201ENST00000618816 94 ntBASIC8.11□□□□□ -1.11
VGFO15240 MIR4272-201ENST00000635924 64 ntBASIC8.11□□□□□ -1.11
VGFO15240 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC8.11□□□□□ -1.11
VGFO15240 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VGFO15240 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
VGFO15240 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms