Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CDC42P1-201ENST00000456658 548 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC078918.1-201ENST00000498515 228 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC091860.1-201ENST00000505723 432 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 POU5F1P7-201ENST00000508759 541 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 HIGD1AP10-201ENST00000527837 282 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 OR5D17P-201ENST00000531492 978 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC055876.1-202ENST00000567053 138 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 CCDC58P3-201ENST00000590792 430 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 RNU6-1192P-201ENST00000612197 107 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 AL355365.1-201ENST00000616480 294 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 RNU6-489P-201ENST00000618289 107 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 MTND4P31-201ENST00000425607 1343 ntBASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM49D1C9J1S8 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 OR1S2-201ENST00000302592 978 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 RNA5SP50-201ENST00000363731 107 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 MIR490-201ENST00000384865 128 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 HSPE1P26-201ENST00000405341 275 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 NANOGP5-201ENST00000424456 877 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 RPL23AP69-201ENST00000431134 458 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AL031663.1-201ENST00000437445 219 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 CYCSP43-201ENST00000438233 310 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 RAB11AP1-201ENST00000442978 646 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 SEPT14P24-201ENST00000447236 180 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 RPS20P32-201ENST00000456044 356 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC034236.1-201ENST00000469891 373 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 RN7SL20P-201ENST00000488827 297 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC005921.1-201ENST00000510589 286 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 IGKV2-36-201ENST00000519999 223 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 IGJP1-201ENST00000522682 475 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 OR10V3P-201ENST00000525712 725 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 CCNG2P1-201ENST00000549521 1000 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 MTND1P24-201ENST00000552175 861 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 MTCYBP23-201ENST00000558717 1102 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 MTATP6P24-201ENST00000576835 677 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 MIR4509-3-201ENST00000578671 94 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 MIR4509-2-201ENST00000583920 94 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC008739.3-201ENST00000603262 127 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC069304.3-201ENST00000603938 1084 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 PRELID3BP8-201ENST00000604148 295 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC073387.2-201ENST00000604797 784 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AL450336.1-201ENST00000605180 586 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC106052.1-201ENST00000608029 497 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC099778.2-201ENST00000610904 211 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 STMN1P1-201ENST00000617809 440 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 MIR4509-1-201ENST00000618224 94 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 VN1R7P-201ENST00000619242 903 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC024595.1-201ENST00000623088 387 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AC006963.1-201ENST00000624003 1052 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 AL353743.1-202ENST00000431724 1695 ntBASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM49D1C9J1S8 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 SNORA31-201ENST00000362607 130 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 RNU6-584P-201ENST00000410350 95 ntBASIC3.09□□□□□ -1.91
TRIM49D1C9J1S8 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms