Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPDC1A2A3K4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPDC1A2A3K4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPDC1A2A3K4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPDC1A2A3K4 AC007529.1-201ENST00000418574 2178 ntBASIC5.18□□□□□ -1.58
PTPDC1A2A3K4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PTPDC1A2A3K4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPDC1A2A3K4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 FARSBP1-201ENST00000435808 1778 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AL356967.1-201ENST00000406305 431 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 RNU2-21P-201ENST00000410368 188 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 NUP35P2-201ENST00000416748 943 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 NANOGP6-201ENST00000429190 847 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 GAPDHP17-201ENST00000449858 1001 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AC099563.1-201ENST00000456086 418 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 MTCO3P38-201ENST00000468910 766 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AC010618.1-201ENST00000469924 477 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AC010683.1-201ENST00000473673 378 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 RNA5SP497-201ENST00000516081 97 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 IGLV3-26-201ENST00000520756 302 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 MTCO3P24-201ENST00000572729 782 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 MIR3682-201ENST00000581338 84 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 RPL23AP92-201ENST00000603609 255 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AC009237.17-201ENST00000618111 748 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AP001005.3-201ENST00000622049 129 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AC000123.2-201ENST00000623124 461 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 SCN1A-220ENST00000641603 12506 ntBASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.17□□□□□ -1.58
PTPDC1A2A3K4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC004520.1-201ENST00000608362 1413 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 RNU6-343P-201ENST00000364709 104 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 Y_RNA.554-201ENST00000384672 102 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 RPS20P14-201ENST00000412545 360 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 PDSS1P1-201ENST00000422953 1114 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 RPS29P17-201ENST00000430795 166 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 HMGB1P36-201ENST00000487709 576 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 RN7SL810P-201ENST00000493031 276 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 RNU6-718P-201ENST00000516166 105 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC124068.1-201ENST00000563131 678 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC092325.1-201ENST00000566449 554 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 ARF4P1-201ENST00000605447 541 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC114781.5-201ENST00000615297 108 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC136475.10-201ENST00000620253 385 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC124864.2-201ENST00000624736 186 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC107027.3-201ENST00000565095 3473 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 CCT4P2-201ENST00000233836 1548 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 ELF2P3-201ENST00000445099 1506 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.16□□□□□ -1.58
PTPDC1A2A3K4 AC006971.1-201ENST00000407916 4486 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms