Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 HMGB2P1-201ENST00000591146 634 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC245014.2-201ENST00000603689 287 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC246785.4-201ENST00000605374 287 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC013476.2-201ENST00000614456 459 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC110994.2-201ENST00000635481 492 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 OR5AK4P-201ENST00000635912 903 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHGA3Q9Y5H0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 OR52B1P-201ENST00000316506 909 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 RNA5SP191-201ENST00000362585 102 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 SNORA62-201ENST00000365493 153 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 U3.32-201ENST00000408116 212 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 HMGN1P24-201ENST00000412282 298 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC104651.1-201ENST00000427559 735 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 NRBF2P3-201ENST00000432731 865 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC091390.1-201ENST00000433904 331 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 DNAJC19P4-201ENST00000440115 345 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC104308.1-201ENST00000454621 333 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AL445433.1-201ENST00000457507 257 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 snoU13.3-201ENST00000459441 104 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 FTH1P2-201ENST00000466086 412 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC126182.1-201ENST00000478134 357 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC091133.4-201ENST00000511142 308 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC022483.1-201ENST00000514020 567 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 RNU2-46P-201ENST00000517038 113 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC016957.1-201ENST00000534895 309 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 DYNLL1P4-201ENST00000549314 266 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC099489.2-201ENST00000574976 260 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 MIR4284-201ENST00000578924 81 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC060771.1-201ENST00000582031 164 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AL031176.1-201ENST00000604554 466 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AL161729.4-201ENST00000604650 476 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AC138649.3-201ENST00000622154 254 ntBASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGA3Q9Y5H0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 TLK1P1-201ENST00000456760 2440 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 RNU1-94P-201ENST00000362627 173 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 Y_RNA.41-201ENST00000362646 102 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 Y_RNA.296-201ENST00000364930 108 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC078974.1-201ENST00000411597 223 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC127526.1-201ENST00000417526 366 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 C4BPAP2-201ENST00000428434 478 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC016712.1-201ENST00000431088 378 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 MTND1P4-201ENST00000435196 415 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AL136380.1-201ENST00000447970 162 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 TPT1P12-201ENST00000448968 492 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AL356981.1-201ENST00000454879 684 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 RN7SL385P-201ENST00000468873 276 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 RN7SL354P-201ENST00000469282 294 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC073073.1-201ENST00000493920 463 ntBASIC4.7□□□□□ -1.66
PCDHGA3Q9Y5H0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms