Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC093663.1-201ENST00000497190 394 ntBASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 RN7SKP13-201ENST00000515933 244 ntBASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 SNORA31.9-201ENST00000516429 84 ntBASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 RN7SKP282-201ENST00000516824 299 ntBASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 CYCSP30-201ENST00000546447 172 ntBASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AC006116.7-201ENST00000590141 756 ntBASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AL445435.1-201ENST00000604232 665 ntBASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AC010738.1-201ENST00000604970 987 ntBASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AP001521.1-201ENST00000609150 300 ntBASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 MIR6719-201ENST00000622428 87 ntBASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AC091925.2-201ENST00000625059 256 ntBASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.94□□□□□ -1.94
KCNIP3Q9Y2W7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 SAR1AP2-201ENST00000392696 594 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 CYCSP45-201ENST00000402289 315 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 RPL21P65-201ENST00000406094 466 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 RPL5P18-201ENST00000406671 891 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 RN7SKP278-201ENST00000410504 342 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 YPEL5P1-201ENST00000419731 367 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AC012065.2-201ENST00000421295 375 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 RPL23AP82-202ENST00000427528 469 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AC079776.3-201ENST00000450665 370 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 RPL35AP28-201ENST00000459730 331 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 RN7SL610P-201ENST00000463845 291 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 CENPBD1P1-201ENST00000464061 469 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AC021205.2-201ENST00000480069 347 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 SETP14-201ENST00000497538 873 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 CAB39P1-201ENST00000502277 460 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AC105914.1-201ENST00000511798 226 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 RNU1-61P-201ENST00000516107 151 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 SNORA31.26-201ENST00000517250 137 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AP001189.2-201ENST00000527320 189 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 OR4P1P-201ENST00000530808 1136 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 LARP7P2-201ENST00000575306 125 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 MIR5708-201ENST00000579723 85 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AC008507.1-201ENST00000587506 734 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 RPL23AP92-201ENST00000603609 255 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 RNU6-1192P-201ENST00000612197 107 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AL390240.1-201ENST00000612950 384 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AL110115.1-201ENST00000614396 364 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 RNU6-489P-201ENST00000618289 107 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AL353748.2-201ENST00000622148 471 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 MKKS-204ENST00000639674 192 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AC017071.1-201ENST00000564407 2204 ntBASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
KCNIP3Q9Y2W7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AL645937.1-201ENST00000641739 1652 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 Z99496.1-201ENST00000469424 1477 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 MIR148B-201ENST00000362252 99 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AL356095.1-201ENST00000417217 199 ntBASIC2.92□□□□□ -1.94
KCNIP3Q9Y2W7 AC245054.1-201ENST00000420944 258 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms