Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RNU6-196P-201ENST00000384315 107 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 CTSL3P-202ENST00000412179 788 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC009237.2-201ENST00000421358 284 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AL590609.2-201ENST00000421430 368 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 SDAD1P3-201ENST00000427380 333 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 MTND4LP10-201ENST00000435146 291 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 PTMAP3-201ENST00000447474 330 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC098824.1-201ENST00000453565 980 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 CCDC75P1-201ENST00000469247 791 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 RPS4XP15-201ENST00000489210 795 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 HMGB3P16-201ENST00000508037 287 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 ATP1B1P1-201ENST00000509767 915 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC092747.2-201ENST00000545069 983 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 OR7K1P-201ENST00000546439 926 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 LINC00561-201ENST00000565815 2738 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 RNU1-20P-201ENST00000363314 162 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 RNY4P14-201ENST00000363656 96 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AL356776.1-201ENST00000406574 447 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 RN7SKP156-201ENST00000410308 342 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 OR2AH1P-201ENST00000425717 928 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AL159987.2-201ENST00000432754 307 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 HSPE1P22-201ENST00000456856 327 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 RNA5SP269-201ENST00000459032 137 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC010301.1-201ENST00000473936 355 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 FGF7P4-201ENST00000509595 295 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 BTG4P1-201ENST00000510421 183 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC087499.8-201ENST00000578406 226 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 MIR3922-201ENST00000585192 84 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 MIR7844-201ENST00000616161 122 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 FP236240.3-201ENST00000623061 327 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 AC025048.6-202ENST00000627667 438 ntBASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.47□□□□□ -1.37
COL17A1Q9UMD9 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL17A1Q9UMD9 AC139769.1-204ENST00000472297 1931 ntBASIC6.46□□□□□ -1.37
COL17A1Q9UMD9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL17A1Q9UMD9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.46□□□□□ -1.37
COL17A1Q9UMD9 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL17A1Q9UMD9 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 MTND5P3-201ENST00000438536 1800 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 OR4A15-201ENST00000314706 1035 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 Y_RNA.145-201ENST00000363527 102 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 Y_RNA.582-201ENST00000391023 95 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 RNA5SP80-201ENST00000410475 111 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 AL009174.1-201ENST00000426577 416 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 SAR1AP4-201ENST00000429225 591 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms