Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 AC135001.1-201ENST00000544546 283 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 AC080013.4-201ENST00000607624 649 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 MTND2P41-201ENST00000637599 773 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 HSPA8P1-201ENST00000425843 1833 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 RNA5SP424-201ENST00000390988 115 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 RNU6-821P-201ENST00000390995 107 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AL121972.1-201ENST00000402023 252 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AL022722.2-201ENST00000402519 180 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 Z98941.1-201ENST00000407764 100 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC127526.1-201ENST00000417526 366 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC092832.1-201ENST00000422934 400 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC006548.1-201ENST00000427470 102 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 MRPS18BP2-201ENST00000434310 759 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 YWHAZP7-201ENST00000436906 631 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 HMGN2P21-201ENST00000447764 270 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 USP9YP10-201ENST00000454868 628 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC010618.1-201ENST00000469924 477 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC087312.1-201ENST00000471411 480 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC147055.4-201ENST00000504399 745 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 USP9YP5-201ENST00000511770 630 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 SNORA31.9-201ENST00000516429 84 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 RNA5SP164-201ENST00000516533 110 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC022695.1-201ENST00000522089 237 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC090888.2-201ENST00000559765 1144 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC090616.5-202ENST00000582111 297 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC015726.1-201ENST00000602353 681 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AL591034.3-201ENST00000605511 685 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 MLECP1-201ENST00000615893 709 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AL136981.2-201ENST00000617319 734 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC040168.1-201ENST00000623594 991 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 AC112484.5-201ENST00000624189 228 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 CR381572.1-201ENST00000625098 102 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 OR4G11P-202ENST00000642116 1414 ntBASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LIMA1Q9UHB6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 RNU6-213P-201ENST00000384051 104 ntBASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 RNU6-837P-201ENST00000391056 108 ntBASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 PSMA6P3-201ENST00000428242 164 ntBASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 AL354941.1-201ENST00000438600 464 ntBASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 AL109741.2-201ENST00000455561 343 ntBASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 RNU7-136P-201ENST00000458819 69 ntBASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 RPL7P19-201ENST00000469948 618 ntBASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 AP000926.1-201ENST00000479573 241 ntBASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 AC021146.1-201ENST00000511202 716 ntBASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 SCARNA14-201ENST00000516903 136 ntBASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 OR5AP1P-201ENST00000529730 940 ntBASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.09□□□□□ -1.75
LIMA1Q9UHB6 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms