Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AP001992.1-205ENST00000462248 379 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 RPS29P26-201ENST00000477483 171 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 LARP7P4-201ENST00000481075 878 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 HMGB1P38-201ENST00000490557 577 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 RPL7L1P13-201ENST00000511702 739 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AC010374.2-201ENST00000512933 535 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 SNORA31.15-201ENST00000516771 132 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AC090136.1-201ENST00000520009 240 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 HMGB1P41-201ENST00000520234 440 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AC100870.1-201ENST00000522035 505 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 OR5BN1P-201ENST00000532955 829 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AL121594.4-201ENST00000556211 1196 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AC012493.2-201ENST00000595083 291 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AL391834.1-201ENST00000609609 560 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 MIR6075-201ENST00000620782 95 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AL122126.1-201ENST00000546905 1318 ntBASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDC42SE2Q9NRR3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 SNORA71.3-201ENST00000362582 128 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 RNU1-140P-201ENST00000365040 165 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 RNU6-1027P-201ENST00000383998 107 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 SEPT7P2-202ENST00000398921 823 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC092638.1-201ENST00000411966 1275 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 MTND4P11-201ENST00000417020 1058 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 USP9YP20-201ENST00000419224 558 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AJ239321.1-201ENST00000424255 564 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 RPS12P2-201ENST00000439728 269 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 BX510359.1-201ENST00000456973 237 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 RPS29P12-201ENST00000460178 152 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AP002371.1-201ENST00000463604 433 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 HMGB1P25-201ENST00000468402 607 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AP000852.1-201ENST00000472460 573 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC009901.1-201ENST00000506703 541 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC090071.1-201ENST00000507713 644 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 HIGD1AP13-201ENST00000509878 289 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC025881.1-201ENST00000518851 512 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC025423.2-201ENST00000537570 439 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 DNAJC8P1-201ENST00000554535 372 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 MIR4444-1-201ENST00000581696 74 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 MIR4444-2-201ENST00000584390 74 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC125494.3-201ENST00000602759 455 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 RPL12P50-201ENST00000603116 116 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC005229.3-201ENST00000603438 323 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC019159.1-201ENST00000605094 187 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 ATP5A1P2-202ENST00000616464 443 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AP003122.6-201ENST00000623831 495 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC010297.1-201ENST00000623948 149 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 CR392039.4-201ENST00000624968 501 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 AP001350.1-201ENST00000601906 1524 ntBASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CDC42SE2Q9NRR3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 OR5H2-201ENST00000355273 945 ntBASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 SNORA14A-201ENST00000364773 135 ntBASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 SNORA18.3-201ENST00000384122 132 ntBASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 UBA52P6-201ENST00000399822 382 ntBASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 AL024507.1-201ENST00000412741 274 ntBASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 AC233728.2-201ENST00000425348 757 ntBASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 AC087499.2-201ENST00000432861 149 ntBASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 AL671855.1-201ENST00000446875 1203 ntBASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 AC009961.3-201ENST00000449832 765 ntBASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 CACYBPP2-201ENST00000453625 678 ntBASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 AC027673.1-201ENST00000456245 405 ntBASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 RNA5SP341-201ENST00000516261 117 ntBASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.79□□□□□ -2.12
CDC42SE2Q9NRR3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms