Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AP001992.1-205ENST00000462248 379 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 RPS27AP17-201ENST00000463344 455 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC108475.1-201ENST00000507880 950 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC026402.1-201ENST00000513642 170 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC093853.1-201ENST00000515689 483 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 RNA5SP497-201ENST00000516081 97 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AP003467.2-201ENST00000520175 319 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 SETP2-201ENST00000553886 926 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 ZNF519P2-201ENST00000557032 169 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC015871.2-201ENST00000603605 948 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AL109618.2-201ENST00000605527 211 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AL008729.2-201ENST00000606393 473 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC091965.4-201ENST00000607691 587 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC008498.1-201ENST00000613012 531 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 U6atac.1-201ENST00000616025 117 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC072046.2-201ENST00000618366 268 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC015871.5-202ENST00000623252 701 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 AP001273.1-201ENST00000624493 3152 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5□□□□□ -1.61
VTA1Q9NP79 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
VTA1Q9NP79 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5□□□□□ -1.61
VTA1Q9NP79 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5□□□□□ -1.61
VTA1Q9NP79 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VTA1Q9NP79 RNA5SP388-201ENST00000362584 119 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 RN7SKP224-201ENST00000364140 325 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5□□□□□ -1.61
VTA1Q9NP79 RPS3AP3-201ENST00000411933 242 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 AL356276.2-201ENST00000435919 558 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 AC073614.1-201ENST00000438690 650 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 PGBD4P3-201ENST00000440731 581 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 AC114495.1-201ENST00000441274 436 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5□□□□□ -1.61
VTA1Q9NP79 AC005297.2-201ENST00000450430 606 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5□□□□□ -1.61
VTA1Q9NP79 IFNWP4-201ENST00000453148 294 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 AC093899.1-201ENST00000457984 376 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 snoU13.8-201ENST00000458890 104 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 TMED11P-201ENST00000479478 690 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 RPL9P33-201ENST00000484311 566 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5□□□□□ -1.61
VTA1Q9NP79 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5□□□□□ -1.61
VTA1Q9NP79 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5□□□□□ -1.61
VTA1Q9NP79 RNA5SP360-201ENST00000516555 118 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 AC134698.5-201ENST00000519444 336 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5□□□□□ -1.61
VTA1Q9NP79 OR5G4P-201ENST00000525251 760 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5□□□□□ -1.61
VTA1Q9NP79 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5□□□□□ -1.61
VTA1Q9NP79 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5□□□□□ -1.61
VTA1Q9NP79 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5□□□□□ -1.61
VTA1Q9NP79 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5□□□□□ -1.61
VTA1Q9NP79 AC137800.2-201ENST00000574375 120 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 OR4G1P-201ENST00000588632 938 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 AC233280.2-201ENST00000603917 1070 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 AC011468.4-201ENST00000603942 409 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 AC113194.1-201ENST00000606037 500 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 AC008250.2-201ENST00000615261 205 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 AC095031.1-201ENST00000623685 672 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5□□□□□ -1.61
VTA1Q9NP79 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5□□□□□ -1.61
VTA1Q9NP79 AC068137.3-201ENST00000639191 341 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 AC073869.6-201ENST00000640656 341 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 CCT4P2-201ENST00000233836 1548 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VTA1Q9NP79 FARSBP1-201ENST00000435808 1778 ntBASIC5□□□□□ -1.61
VTA1Q9NP79 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5□□□□□ -1.61
VTA1Q9NP79 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
VTA1Q9NP79 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5□□□□□ -1.61
VTA1Q9NP79 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VTA1Q9NP79 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VTA1Q9NP79 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VTA1Q9NP79 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VTA1Q9NP79 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VTA1Q9NP79 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 AC139769.1-204ENST00000472297 1931 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VTA1Q9NP79 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 RNU6-359P-201ENST00000365466 108 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.99□□□□□ -1.61
VTA1Q9NP79 RNU6-809P-201ENST00000384461 107 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 MTND4LP20-201ENST00000402379 270 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 AL022722.2-201ENST00000402519 180 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 RNA5SP317-201ENST00000410176 116 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 RNA5SP311-201ENST00000411290 116 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 RPL23AP38-201ENST00000423801 469 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 AL138785.1-201ENST00000425821 331 ntBASIC4.99□□□□□ -1.61
VTA1Q9NP79 AL445669.1-201ENST00000426743 755 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms