Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDH9Q9HC56 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC011477.1-204ENST00000623416 1325 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 CR381670.1-201ENST00000624291 1693 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 RPL23AP29-201ENST00000397284 453 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AL450338.1-201ENST00000407987 512 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 RNU6-628P-201ENST00000410675 107 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 PIGPP2-201ENST00000411569 458 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 MTND1P20-201ENST00000430341 950 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 MTCYBP39-201ENST00000437562 491 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC073387.1-201ENST00000453261 709 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 RPL30P6-201ENST00000475925 342 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 TRBV12-2-201ENST00000489763 344 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 SUMO2P20-201ENST00000520803 283 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 OR4A12P-201ENST00000530847 918 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AL121766.1-201ENST00000547436 487 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC007954.1-201ENST00000554198 494 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC120057.2-201ENST00000571520 271 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC141257.3-201ENST00000572906 215 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 MTCYBP33-201ENST00000575007 1130 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 NBR2-204ENST00000587322 63 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AL592436.1-201ENST00000605135 558 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 BRDTP1-201ENST00000605735 677 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC073114.1-201ENST00000612027 490 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC099669.2-201ENST00000616549 437 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC008443.7-201ENST00000622195 246 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AC068724.3-201ENST00000625906 87 ntBASIC3.98□□□□□ -1.77
PCDH9Q9HC56 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH9Q9HC56 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 Y_RNA.18-201ENST00000362461 102 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 RNU6-216P-201ENST00000363282 104 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 FABP12P1-201ENST00000401911 322 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AL031577.2-201ENST00000404133 280 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 PPIAP31-201ENST00000405422 495 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 HSPE1P8-201ENST00000406997 288 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 RPS15AP38-201ENST00000413110 372 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 OR8F1P-201ENST00000425243 930 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AL590103.1-201ENST00000434488 307 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 SLC31A1P1-201ENST00000451221 567 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 MTCO3P20-201ENST00000454926 688 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 RPL18AP17-201ENST00000455326 198 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 RPL31P3-201ENST00000458430 332 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 RPL21P11-201ENST00000461458 483 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC068587.1-201ENST00000483613 781 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 RPS4XP15-201ENST00000489210 795 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC146944.2-203ENST00000502493 354 ntBASIC3.97□□□□□ -1.77
PCDH9Q9HC56 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
PCDH9Q9HC56 AC005178.1-201ENST00000508392 440 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms