Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SNORA3.3-201ENST00000408712 125 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 RPL31P2-201ENST00000413849 377 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 MTND2P5-201ENST00000432656 1006 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC244505.4-201ENST00000434905 287 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 Z80107.1-201ENST00000436830 412 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 SSXP5-201ENST00000443473 287 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC007327.1-201ENST00000447461 264 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 TPT1P13-201ENST00000449760 499 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 RPS20P32-201ENST00000456044 356 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 RPS29P33-201ENST00000456717 146 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC093663.1-201ENST00000497190 394 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 MTCYBP16-201ENST00000509187 1129 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 RN7SKP31-201ENST00000516354 278 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 RNU2-58P-201ENST00000516403 183 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 RNU6-1261P-201ENST00000517194 104 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC027309.2-201ENST00000520566 192 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 LARP7P2-201ENST00000575306 125 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 MIR4760-201ENST00000585040 80 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AL390838.2-201ENST00000602394 274 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC112230.1-201ENST00000604342 547 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC124312.4-201ENST00000605533 310 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 RNU4-89P-201ENST00000607443 133 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC023158.2-201ENST00000614876 543 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 AC013470.4-201ENST00000619978 986 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 SNORA50A-202ENST00000629536 136 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 PABPC1P7-201ENST00000413177 1513 ntBASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VIPAS39Q9H9C1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 GABPAP-201ENST00000419271 1356 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AL133383.2-201ENST00000622958 2336 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 SNORA51.4-201ENST00000364993 124 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 SNORD82-201ENST00000365530 70 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 SNORA51.6-201ENST00000384151 125 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 SNRPEP2-201ENST00000397592 279 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 RNA5SP80-201ENST00000410475 111 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 RNU2-37P-201ENST00000410695 177 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AL133384.1-201ENST00000412744 351 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AL592310.1-201ENST00000414330 671 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 RPL32P35-201ENST00000415214 394 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC127537.2-201ENST00000439258 465 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 VN1R10P-201ENST00000447106 875 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 TRBV26-201ENST00000456572 344 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 RN7SL75P-201ENST00000461926 281 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC146507.1-201ENST00000468335 354 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC114322.1-201ENST00000506771 926 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC010460.2-201ENST00000509054 677 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC023141.12-201ENST00000512399 199 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC092593.2-201ENST00000513866 913 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AP001372.4-201ENST00000524889 472 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 HIGD1AP10-201ENST00000527837 282 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC009643.1-201ENST00000532030 391 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AP004242.1-201ENST00000533701 349 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 OR6C73P-201ENST00000546432 358 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC008127.2-201ENST00000549925 1075 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC107954.1-201ENST00000565906 727 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 MIR4284-201ENST00000578924 81 ntBASIC3.53□□□□□ -1.84
VIPAS39Q9H9C1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms