Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 AP001350.1-201ENST00000601906 1524 ntBASIC3.7□□□□□ -1.82
CCSER1Q9C0I3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 Z83843.1-201ENST00000604070 3685 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 RNA5SP267-201ENST00000364893 126 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 SNORA70.4-201ENST00000365509 134 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 RNU6-468P-201ENST00000384003 109 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 RNU6-921P-201ENST00000384361 107 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 RNA5SP107-201ENST00000411358 122 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 BX323014.1-201ENST00000412876 237 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 GTF2IP23-201ENST00000423746 351 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AC012497.1-201ENST00000429392 575 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 UBE2V1P6-201ENST00000430840 422 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AL512637.2-201ENST00000431287 1256 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 CST9LP2-201ENST00000437612 320 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 PRSS3P4-201ENST00000453323 162 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 RN7SL442P-201ENST00000473804 320 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 RPS4XP13-201ENST00000483219 789 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 IGKV2D-36-201ENST00000518643 226 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AC092451.2-201ENST00000538746 658 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 MTCO1P40-201ENST00000574371 625 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 TMF1P1-201ENST00000576058 373 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 RN7SL339P-201ENST00000580597 296 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AC002487.1-201ENST00000604565 994 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AC078880.5-201ENST00000617845 421 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AC006249.1-201ENST00000621223 471 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AC091152.2-201ENST00000591628 2569 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 AL353746.1-201ENST00000566293 6881 ntBASIC3.69□□□□□ -1.82
CCSER1Q9C0I3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 RNU6-619P-201ENST00000365146 108 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AP000567.1-201ENST00000406413 156 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 RNA5SP56-201ENST00000410277 118 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 BX890604.2-201ENST00000427883 474 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AC234064.1-201ENST00000436312 247 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 RPL7P49-201ENST00000471402 708 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 VN1R17P-201ENST00000472048 1090 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 RPL7P38-201ENST00000488396 739 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AL358832.1-201ENST00000497800 389 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AC021678.1-201ENST00000505195 936 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AC074250.1-201ENST00000511117 192 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 SYF2P1-201ENST00000550658 413 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AL669831.4-202ENST00000590817 238 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AC011492.1-201ENST00000600023 315 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 SRGNP1-201ENST00000603392 451 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AC007179.3-201ENST00000604976 235 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 VN1R74P-201ENST00000613259 503 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 AC103798.2-201ENST00000624292 632 ntBASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCSER1Q9C0I3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AC138915.3-201ENST00000562908 1389 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 RNU6-115P-201ENST00000364310 107 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms