Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNU6-278P-201ENST00000390945 109 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 RPS4XP8-201ENST00000402039 771 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AL583834.1-201ENST00000406943 343 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 RN7SKP216-201ENST00000411050 312 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AMD1P2-201ENST00000412936 992 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AL807761.1-201ENST00000417622 171 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 UQCRBP1-201ENST00000421129 336 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC016712.1-201ENST00000431088 378 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC092162.1-201ENST00000432828 434 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 BTF3P10-201ENST00000433415 495 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC234775.1-201ENST00000454247 670 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AL049714.1-201ENST00000466686 347 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 RPS3AP50-201ENST00000487064 803 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC069439.1-201ENST00000494739 167 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 FCF1P3-201ENST00000496394 590 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 RNU6-1095P-201ENST00000516148 108 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 MTND1P35-201ENST00000526739 508 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC104383.1-201ENST00000530297 370 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AL359212.1-201ENST00000556608 614 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 MIR3691-201ENST00000578066 90 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC007621.1-201ENST00000604544 437 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 RNA5SP108-201ENST00000605921 117 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC004067.1-201ENST00000608733 700 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC093788.1-201ENST00000609356 927 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 Mico1.1-201ENST00000611698 204 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC022106.2-201ENST00000620114 757 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC015871.5-202ENST00000623252 701 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AL008636.1-201ENST00000625038 1018 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 AC099654.14-201ENST00000638599 341 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM55Q9BYV6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC083843.3-201ENST00000623679 2186 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RNU6-1120P-201ENST00000362988 108 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RNA5SP443-201ENST00000363083 132 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RNU5E-8P-201ENST00000363502 116 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RNU6-1322P-201ENST00000364309 107 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 Y_RNA.295-201ENST00000364918 102 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC068050.1-201ENST00000394891 380 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RN7SKP125-201ENST00000410481 302 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RN7SKP213-201ENST00000410746 298 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 CCDC58P2-201ENST00000417131 366 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 BEND7P1-201ENST00000422058 457 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AL590762.4-201ENST00000425885 253 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RPL35AP22-201ENST00000436855 335 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RPL7P54-201ENST00000438336 674 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RPS15AP9-201ENST00000439856 381 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC079781.2-201ENST00000446424 169 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AL031584.1-201ENST00000447169 754 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 VN1R34P-201ENST00000447387 883 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC079168.1-201ENST00000458741 345 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RNU6-420P-201ENST00000458780 107 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RPL7AP6-201ENST00000477943 801 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC135721.1-201ENST00000497954 479 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC114797.1-201ENST00000514003 728 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RNU6-1281P-201ENST00000516223 105 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RNU6-410P-201ENST00000517006 107 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC011979.2-201ENST00000527568 352 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC126177.3-201ENST00000551839 688 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms