Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RPL23AP87-202ENST00000573039 466 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 MIR548AC-201ENST00000585049 88 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6□□□□□ -1.45
USB1Q9BQ65 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6□□□□□ -1.45
USB1Q9BQ65 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6□□□□□ -1.45
USB1Q9BQ65 U6.92-201ENST00000636464 89 ntBASIC6□□□□□ -1.45
USB1Q9BQ65 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6□□□□□ -1.45
USB1Q9BQ65 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6□□□□□ -1.45
USB1Q9BQ65 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6□□□□□ -1.45
USB1Q9BQ65 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USB1Q9BQ65 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USB1Q9BQ65 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
USB1Q9BQ65 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USB1Q9BQ65 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USB1Q9BQ65 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 AC010329.2-201ENST00000595195 2737 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 AC074141.1-201ENST00000588129 2995 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USB1Q9BQ65 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USB1Q9BQ65 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
USB1Q9BQ65 RPL9P7-201ENST00000330965 580 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 AC092634.1-201ENST00000366505 199 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 SNORA70.9-201ENST00000384370 135 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 MIR521-1-201ENST00000384902 87 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 AC092447.6-201ENST00000414578 210 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 RPEP4-201ENST00000437636 602 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 AL513043.1-201ENST00000439124 535 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 AL445433.1-201ENST00000457507 257 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 RPL9P9-202ENST00000466501 579 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 RN7SL83P-201ENST00000468131 297 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 RPL30P10-201ENST00000488148 337 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 RN7SKP258-201ENST00000517151 304 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 IGKV2-38-201ENST00000517443 247 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 IGKV2D-38-201ENST00000518423 240 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 AC087752.2-201ENST00000521219 281 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 RN7SL66P-201ENST00000582099 264 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 AC087575.1-201ENST00000585087 229 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USB1Q9BQ65 HAUS6P2-201ENST00000433254 2404 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 AC005225.5-201ENST00000623547 2225 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USB1Q9BQ65 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
USB1Q9BQ65 LRRC37A12P-201ENST00000454917 1801 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 AC109446.4-201ENST00000623235 2755 ntBASIC5.99□□□□□ -1.45
USB1Q9BQ65 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USB1Q9BQ65 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USB1Q9BQ65 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.99□□□□□ -1.45
USB1Q9BQ65 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
USB1Q9BQ65 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 RNU1-5P-201ENST00000362684 144 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 MIR323B-201ENST00000385269 82 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 AL353133.1-201ENST00000407695 401 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 Y_RNA.602-201ENST00000410535 92 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 RN7SKP205-201ENST00000410999 307 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 EI24P1-201ENST00000416584 867 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 AC013403.1-201ENST00000436954 263 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USB1Q9BQ65 AC009567.2-201ENST00000502989 349 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.98□□□□□ -1.45
USB1Q9BQ65 SNORA31.3-201ENST00000516029 96 ntBASIC5.98□□□□□ -1.45
USB1Q9BQ65 RN7SKP196-201ENST00000516267 345 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms