Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC006480.1-201ENST00000449887 378 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC108059.3-201ENST00000456388 214 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 SNORD19B-201ENST00000459623 84 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 IGBP1P4-201ENST00000503202 879 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 RPS4XP20-201ENST00000505751 772 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC004062.1-201ENST00000509926 645 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 TTC39CP1-201ENST00000512513 755 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 RNA5SP92-201ENST00000516437 110 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 RNA5SP373-201ENST00000517271 95 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 NARSP2-201ENST00000518524 679 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC020661.2-201ENST00000560114 134 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC093249.1-201ENST00000567049 203 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 MIR7853-201ENST00000584820 132 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC110743.1-201ENST00000584870 478 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC108738.1-201ENST00000603703 237 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC244100.1-202ENST00000621554 382 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC015908.5-201ENST00000623289 343 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 LARP1BP1-201ENST00000506036 1359 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AP001029.2-203ENST00000589795 4910 ntBASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
PTCHD1Q96NR3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 Y_RNA.100-201ENST00000363141 102 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 RNU6-831P-201ENST00000384548 107 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AL049697.2-201ENST00000403708 294 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 RN7SKP247-201ENST00000411094 308 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 GPS2P1-201ENST00000411761 986 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 CHIAP3-201ENST00000423668 1133 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC239809.1-201ENST00000450470 217 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AL590639.1-201ENST00000456484 337 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 RPL21P99-201ENST00000480369 423 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC022133.1-201ENST00000490961 571 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 RNA5SP228-201ENST00000516232 133 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 OR10G5P-201ENST00000532733 358 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC128657.1-201ENST00000549459 145 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC124068.1-201ENST00000563131 678 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC012182.1-201ENST00000570133 895 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 COX6CP3-201ENST00000580869 223 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC006272.2-201ENST00000594725 163 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC126915.2-201ENST00000610957 190 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC090971.5-201ENST00000621102 293 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC004972.1-201ENST00000623934 2209 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 AC091046.3-201ENST00000631455 1574 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 THAP12P4-201ENST00000528321 2266 ntBASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTCHD1Q96NR3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms