Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 MSL3P1-202ENST00000440028 1468 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 RNU6-552P-201ENST00000362869 119 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 U3.2-201ENST00000362981 210 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 Y_RNA.404-201ENST00000383978 102 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 MIR506-201ENST00000384998 124 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 RNU6-244P-201ENST00000391028 104 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 AL360182.1-201ENST00000397433 468 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 RPSAP35-201ENST00000413753 818 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 OR6C66P-201ENST00000414917 930 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 HSPE1P16-201ENST00000426640 348 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 NEFMP1-201ENST00000443423 1006 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 AC133473.1-201ENST00000455173 299 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 RPS18P6-201ENST00000476880 458 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 SUMO2P4-201ENST00000504193 276 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 GAPDHP62-201ENST00000515313 990 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 SNORD27.1-201ENST00000516319 72 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 RNU5B-3P-201ENST00000516601 115 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 RNU6-714P-201ENST00000516963 103 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 AC023043.2-201ENST00000589678 1026 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 AL606534.2-204ENST00000635008 178 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 AC000095.2-202ENST00000637415 154 ntBASIC6.54□□□□□ -1.36
TRIM47Q96LD4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM47Q96LD4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC004656.1-201ENST00000568479 4951 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC015799.1-201ENST00000622996 3122 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 Y_RNA.26-201ENST00000362539 101 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 RNA5SP305-201ENST00000362665 119 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 RNU6-81P-201ENST00000365608 104 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 Y_RNA.539-201ENST00000384635 107 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 RNU6-903P-201ENST00000391270 109 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC110754.1-201ENST00000399740 601 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 RN7SKP17-201ENST00000411242 351 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC078974.1-201ENST00000411597 223 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 BX323014.1-201ENST00000412876 237 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 RPL7P2-201ENST00000427639 268 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 RPL7P28-201ENST00000437739 740 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AL035090.1-201ENST00000454835 332 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AL353752.1-201ENST00000454946 260 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC073610.1-201ENST00000489971 396 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC078899.1-201ENST00000521432 1185 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC107934.1-201ENST00000522215 217 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 HSPE1P2-201ENST00000554777 306 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC025884.1-201ENST00000556034 378 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC006115.2-201ENST00000596823 202 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC104662.1-201ENST00000604448 511 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC009229.3-201ENST00000608056 282 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 DUSP12P1-201ENST00000612874 516 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC010378.1-201ENST00000619270 362 ntBASIC6.53□□□□□ -1.36
TRIM47Q96LD4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM47Q96LD4 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms