Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 U8.1-201ENST00000362843 134 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RNU6-942P-201ENST00000363002 107 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 SNORA51.5-201ENST00000384126 131 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 SNORA29-201ENST00000384183 140 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 SNORA51.10-201ENST00000384418 136 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 MIR555-201ENST00000384987 96 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 MT-TT-201ENST00000387460 66 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RPL24P7-201ENST00000399435 453 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 ZNF37CP-201ENST00000406795 241 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RNU4-43P-201ENST00000410628 137 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 AC004986.1-201ENST00000414855 607 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 AC023141.10-201ENST00000415634 200 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 AC128677.1-201ENST00000436016 442 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 HMGB3P8-201ENST00000449709 577 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RPS18P13-201ENST00000461260 454 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 AC022730.2-201ENST00000465359 452 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RPL7AP56-201ENST00000476420 791 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RN7SL314P-201ENST00000490735 292 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RN7SL635P-201ENST00000492123 296 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 GMPSP1-201ENST00000514075 579 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RN7SKP19-201ENST00000516016 252 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RNA5SP395-201ENST00000516567 118 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 AC100823.2-201ENST00000518337 699 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RPL23AP53-201ENST00000521854 457 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 AP003730.1-201ENST00000524605 285 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 AP004833.3-201ENST00000531893 322 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RN7SL311P-201ENST00000579858 306 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 IGLJCOR18-201ENST00000584002 424 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 BOLA2P1-201ENST00000584794 232 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 AP001120.4-201ENST00000590231 108 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 AL136985.2-201ENST00000607372 535 ntBASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.65□□□□□ -1.34
MS4A3Q96HJ5 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
MS4A3Q96HJ5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC6.65□□□□□ -1.35
MS4A3Q96HJ5 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MS4A3Q96HJ5 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
MS4A3Q96HJ5 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MS4A3Q96HJ5 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MS4A3Q96HJ5 THAP12P5-201ENST00000405864 2275 ntBASIC6.65□□□□□ -1.35
MS4A3Q96HJ5 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MS4A3Q96HJ5 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MS4A3Q96HJ5 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MS4A3Q96HJ5 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 Y_RNA.163-201ENST00000363702 113 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 RNU5F-3P-201ENST00000363767 117 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 RNU6-1296P-201ENST00000383879 107 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 RNU6-1074P-201ENST00000383995 104 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 RNU1-74P-201ENST00000384108 171 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 Y_RNA.498-201ENST00000384460 102 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 RPL21P67-201ENST00000402896 478 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 BCRP8-201ENST00000412037 255 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 AC245047.4-201ENST00000433189 144 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 AL589765.3-201ENST00000446084 462 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 RN7SL213P-201ENST00000463482 317 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 RN7SL55P-201ENST00000464534 297 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 RN7SL869P-201ENST00000497032 300 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 HIGD1AP3-201ENST00000515857 278 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 AL021918.1-201ENST00000603933 236 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 uc_338.21-201ENST00000622458 147 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 AC012640.5-201ENST00000623897 319 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 AC111152.1-202ENST00000635848 339 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 OR52B5P-204ENST00000641744 3467 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 NBPF8-201ENST00000583271 5330 ntBASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MS4A3Q96HJ5 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms