Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC4Q92889 MIR5186-201ENST00000577504 120 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 MIR3934-201ENST00000579806 107 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AC091178.1-203ENST00000584586 279 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AC006504.3-201ENST00000586818 523 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.13□□□□□ -1.59
ERCC4Q92889 NF1P5-201ENST00000588287 448 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC4Q92889 AC011451.2-201ENST00000604303 598 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AL139286.1-201ENST00000604465 483 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC4Q92889 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.13□□□□□ -1.59
ERCC4Q92889 AP002360.3-201ENST00000607673 710 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 Mico1.1-201ENST00000611698 204 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AL359880.1-201ENST00000621879 266 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC4Q92889 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC4Q92889 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ERCC4Q92889 AC114546.3-201ENST00000623582 1734 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 OR11H5P-202ENST00000641612 1325 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.13□□□□□ -1.59
ERCC4Q92889 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
ERCC4Q92889 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ERCC4Q92889 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
ERCC4Q92889 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.13□□□□□ -1.59
ERCC4Q92889 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
ERCC4Q92889 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
ERCC4Q92889 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ERCC4Q92889 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.13□□□□□ -1.59
ERCC4Q92889 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ERCC4Q92889 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ERCC4Q92889 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ERCC4Q92889 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ERCC4Q92889 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
ERCC4Q92889 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ERCC4Q92889 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ERCC4Q92889 AL590240.1-201ENST00000334118 313 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 Y_RNA.9-201ENST00000362354 101 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 RNU6-289P-201ENST00000364093 107 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 RNU1-63P-201ENST00000383902 164 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ERCC4Q92889 FGF7P8-201ENST00000402994 292 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 RPS3AP9-201ENST00000417027 792 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.12□□□□□ -1.59
ERCC4Q92889 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.12□□□□□ -1.59
ERCC4Q92889 TIMM9P3-201ENST00000428659 274 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 RPS26P56-201ENST00000444468 240 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 H2AFZP5-201ENST00000446960 382 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.12□□□□□ -1.59
ERCC4Q92889 OR1H1P-201ENST00000448731 937 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.12□□□□□ -1.59
ERCC4Q92889 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.12□□□□□ -1.59
ERCC4Q92889 MTCO1P42-201ENST00000457379 726 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 RPL7P22-201ENST00000466005 733 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 RPS26P28-201ENST00000470806 348 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 OR52A4P-201ENST00000472867 958 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 IGLV2-34-201ENST00000490007 283 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 AC090453.1-201ENST00000495560 436 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 AC019235.1-201ENST00000503847 207 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 AC024589.1-201ENST00000512207 263 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 BRD9P1-201ENST00000529855 560 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 ZNF705CP-201ENST00000530515 889 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.12□□□□□ -1.59
ERCC4Q92889 AL391358.1-201ENST00000605342 190 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 HSPE1P14-201ENST00000605812 302 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 AC008966.2-201ENST00000606157 453 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.12□□□□□ -1.59
ERCC4Q92889 AC090948.2-201ENST00000607363 564 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 AC104458.1-201ENST00000608243 463 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 AC069234.5-201ENST00000611056 416 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 MIR6853-201ENST00000619642 74 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 AC092794.2-201ENST00000620933 563 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 DUXAP9-208ENST00000622815 614 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ERCC4Q92889 AL022578.1-201ENST00000439330 1433 ntBASIC5.12□□□□□ -1.59
ERCC4Q92889 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.12□□□□□ -1.59
ERCC4Q92889 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ERCC4Q92889 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC4Q92889 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.11□□□□□ -1.59
ERCC4Q92889 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ERCC4Q92889 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.11□□□□□ -1.59
ERCC4Q92889 AC021146.4-201ENST00000309229 279 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC4Q92889 MIR659-201ENST00000384963 97 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 MTCO3P40-201ENST00000392516 676 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 GSTA9P-201ENST00000406231 611 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 RNA5SP113-201ENST00000410486 84 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 COX6B1P1-201ENST00000415962 213 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC4Q92889 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.11□□□□□ -1.59
ERCC4Q92889 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC4Q92889 HMGB1P31-201ENST00000437242 427 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 SKP1P1-201ENST00000438081 489 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 AC005154.2-201ENST00000438110 379 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 RPS3AP41-201ENST00000462701 778 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 AC010469.1-201ENST00000463864 576 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 AC010683.1-201ENST00000473673 378 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 AC012158.1-204ENST00000483430 465 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 RPS23P1-201ENST00000491662 432 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms