Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 MIR372-201ENST00000362225 67 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 SNORA37-201ENST00000384504 129 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 RNU6-907P-201ENST00000390924 102 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 RNU6-244P-201ENST00000391028 104 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 RNU6-575P-201ENST00000411326 105 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 RPL17P36-201ENST00000420302 549 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AL365184.2-201ENST00000431139 435 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AL035458.1-201ENST00000433096 585 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 EIF4A1P11-201ENST00000451239 222 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AL445433.1-201ENST00000457507 257 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 RNA5SP103-201ENST00000459503 118 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 ACTG1P13-201ENST00000486987 1043 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AC108078.1-201ENST00000508073 725 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 FGF7P4-201ENST00000509595 295 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AC009646.1-201ENST00000510455 318 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 KCTD9P2-201ENST00000512203 1013 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 ARL2BPP2-201ENST00000550907 489 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 BNIP3P5-201ENST00000562290 498 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AP001542.2-201ENST00000593141 364 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 RPL7P50-201ENST00000600588 727 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AL139286.1-201ENST00000604465 483 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AL035413.2-201ENST00000604801 525 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AC106900.2-201ENST00000604994 317 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 MIR6867-201ENST00000610636 67 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 FAM27D1-201ENST00000612308 341 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AC005086.4-201ENST00000623065 213 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AC138305.3-201ENST00000624988 240 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 MIR6863-201ENST00000636112 90 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 MTND4P27-201ENST00000450813 1354 ntBASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SH3RF3Q8TEJ3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 SPRR2C-201ENST00000290702 219 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 METTL21EP-201ENST00000298105 713 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 RNU1-44P-201ENST00000384453 163 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 MIR1911-201ENST00000410783 80 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AL590609.2-201ENST00000421430 368 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AC007742.1-201ENST00000425789 329 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 ELOCP26-201ENST00000436067 329 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 RFC5P1-201ENST00000454419 874 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 RPL23AP12-201ENST00000467573 473 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AC090013.1-201ENST00000485147 480 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AC107398.1-201ENST00000486904 505 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 RPL7P24-201ENST00000493052 752 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AF235103.2-201ENST00000525753 346 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 OR4A12P-201ENST00000530847 918 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 VN1R84P-201ENST00000593697 235 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AC069304.2-201ENST00000605154 435 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AP005137.2-201ENST00000609238 400 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AL592295.2-201ENST00000612578 206 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 YWHAEP7-203ENST00000622054 312 ntBASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SH3RF3Q8TEJ3 MTCO1P23-201ENST00000415223 1526 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms