Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AC024619.4-201ENST00000580924 316 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 UBE2V2P2-201ENST00000587677 504 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 AC174048.1-201ENST00000603389 144 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 AC008945.2-201ENST00000606056 604 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 AC004696.1-201ENST00000614345 607 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 SNX18P1Y-201ENST00000616231 511 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 AC068831.8-201ENST00000620171 435 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 AC067931.1-201ENST00000624190 671 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 AC099654.5-201ENST00000636479 350 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 AL133243.3-201ENST00000617415 3004 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 AC068870.1-201ENST00000563737 2455 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 MTND4P12-201ENST00000498999 1377 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 AL157700.1-201ENST00000561973 1432 ntBASIC4.38□□□□□ -1.71
CLRN3Q8NCR9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC131971.1-201ENST00000332881 1482 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 API5P2-201ENST00000397055 1498 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AP001350.1-201ENST00000601906 1524 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 OR4G1P-203ENST00000641984 1631 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 RN7SKP104-201ENST00000362605 328 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 SNORA73.1-201ENST00000363107 205 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 RNU6-946P-201ENST00000383878 107 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 RNU6-701P-201ENST00000384059 107 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 HSPD1P16-201ENST00000402302 394 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 RN7SKP86-201ENST00000410454 332 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 PTPN2P1-201ENST00000423212 1072 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC079780.1-201ENST00000428259 207 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 RPL36AP53-201ENST00000432891 316 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 RPL21P112-201ENST00000434403 463 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 USP9YP7-201ENST00000436723 430 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 RPL35AP21-201ENST00000437667 333 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC234771.4-201ENST00000441416 730 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 USP9YP32-201ENST00000452432 430 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 NXT1P1-201ENST00000458481 316 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AP000852.1-201ENST00000472460 573 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 VN1R105P-201ENST00000486595 910 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC083795.1-201ENST00000491760 320 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 RPS27AP13-201ENST00000498403 237 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC008628.2-201ENST00000502605 298 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC008629.2-201ENST00000503783 483 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC108078.2-201ENST00000510750 236 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC114781.4-201ENST00000513707 639 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC103843.2-201ENST00000530523 682 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AL049779.2-201ENST00000553847 315 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC012409.3-201ENST00000611343 981 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC005514.1-201ENST00000623521 208 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC007603.3-201ENST00000636915 979 ntBASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.37□□□□□ -1.71
CLRN3Q8NCR9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC103710.2-202ENST00000641454 2853 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 MAPK10-320ENST00000641462 6696 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 OR52B3P-201ENST00000314715 928 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 RNU6-552P-201ENST00000362869 119 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 Y_RNA.86-201ENST00000363020 111 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 Y_RNA.279-201ENST00000364763 95 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 SMIM11P1-201ENST00000369586 178 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 RN7SKP205-201ENST00000410999 307 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AL096829.1-201ENST00000413677 457 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC009237.10-201ENST00000414112 510 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC114491.1-201ENST00000416095 246 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC009161.1-201ENST00000417306 376 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 RPL18AP14-201ENST00000417685 526 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 RIMKLBP2-201ENST00000424737 654 ntBASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.36□□□□□ -1.71
CLRN3Q8NCR9 RPL7L1P10-201ENST00000427790 463 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms